Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 GTF2IP12-201ENST00000456547 356 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 RPS20P4-201ENST00000461659 355 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 NDUFA5P9-201ENST00000472609 340 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC016559.2-201ENST00000510759 359 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 RNA5SP230-201ENST00000517039 122 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 MRPS36P3-201ENST00000519284 130 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC135279.1-201ENST00000543493 504 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 NANOGNBP2-201ENST00000544753 553 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC079600.1-201ENST00000550326 297 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC011611.5-201ENST00000552477 578 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 MTND4P33-201ENST00000556706 766 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 RBM22P12-201ENST00000567098 1255 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC079315.1-201ENST00000602952 623 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC021171.1-201ENST00000603137 706 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC009027.1-201ENST00000604510 479 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC079610.2-201ENST00000604818 690 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC107952.2-201ENST00000606048 486 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC064807.4-201ENST00000607201 407 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC091304.6-201ENST00000619761 202 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AP000550.3-201ENST00000637734 379 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC139713.2-210ENST00000641741 992 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 AC090220.1-201ENST00000593078 1699 ntBASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
ATG4AQ8WYN0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 MTND5P31-201ENST00000419366 1374 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 OR9G4-201ENST00000302957 984 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 RN7SKP81-201ENST00000365603 331 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 RNU6-932P-201ENST00000391108 106 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 RNA5SP105-201ENST00000391123 113 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AL596448.1-201ENST00000415024 392 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC002069.1-201ENST00000429649 1159 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC090018.1-201ENST00000434369 367 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 PA2G4P6-201ENST00000438325 1197 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 MTCYBP12-201ENST00000440559 1134 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AP000797.2-201ENST00000475768 606 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC109481.1-201ENST00000509173 282 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC098976.1-201ENST00000513014 541 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 NDUFS5P6-201ENST00000529136 295 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 RN7SL356P-201ENST00000582228 248 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms