Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 HMGA1P8-201ENST00000414130 321 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 BTF3L4P3-201ENST00000418879 476 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC140479.3-201ENST00000418944 1126 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AL139148.1-201ENST00000427122 680 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AL731534.1-201ENST00000434711 269 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC009961.2-201ENST00000435771 251 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 Z82210.1-201ENST00000440037 231 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 PIGFP3-201ENST00000441918 722 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 RPL10P1-201ENST00000447844 644 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 FO393401.2-202ENST00000450773 541 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 NDUFA12P1-201ENST00000455914 406 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AL135902.1-201ENST00000458017 384 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 snoU13.20-201ENST00000459180 104 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 RN7SL685P-201ENST00000476271 298 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC018475.1-201ENST00000478358 465 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AL049874.2-201ENST00000492636 288 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 PRSS3P1-201ENST00000503996 742 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 MTCO3P28-201ENST00000513351 515 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 MTCYBP44-201ENST00000514835 823 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 RN7SKP298-201ENST00000515950 94 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 RNU6-1092P-201ENST00000516955 87 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC008446.1-201ENST00000522454 451 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 LINC01298-201ENST00000523171 519 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AP000781.2-202ENST00000529411 681 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC022832.1-201ENST00000530718 645 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 NTAN1P3-201ENST00000535885 715 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 TRHDE-AS1-204ENST00000550334 403 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC091544.3-202ENST00000554246 373 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 RPS3AP4-201ENST00000555161 764 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 FAM30C-201ENST00000561158 410 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC023824.6-201ENST00000565523 703 ntTSL 2 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 LINC00555-201ENST00000569288 442 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC090282.2-201ENST00000573526 931 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC103949.1-201ENST00000582064 457 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 PCGF7P-201ENST00000595406 1051 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC129492.5-201ENST00000603489 315 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC006566.1-201ENST00000608943 513 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC103710.2-201ENST00000609912 942 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AL138880.2-201ENST00000616214 239 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AL137003.2-201ENST00000606924 2538 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 SCN1A-220ENST00000641603 12506 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SVIPQ8NHG7 ZFRP1-201ENST00000457579 2970 ntBASIC4.05□□□□□ -1.76
SVIPQ8NHG7 AC022336.2-201ENST00000568966 2538 ntBASIC4.04□□□□□ -1.76
SVIPQ8NHG7 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SVIPQ8NHG7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SVIPQ8NHG7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SVIPQ8NHG7 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SVIPQ8NHG7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.04□□□□□ -1.76
SVIPQ8NHG7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.04□□□□□ -1.76
SVIPQ8NHG7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SVIPQ8NHG7 TEKT4P2-202ENST00000559466 1312 ntBASIC4.04□□□□□ -1.76
SVIPQ8NHG7 CEP89-204ENST00000590597 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SVIPQ8NHG7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.04□□□□□ -1.76
SVIPQ8NHG7 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.04□□□□□ -1.76
SVIPQ8NHG7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms