Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 RNA5SP183-201ENST00000362452 119 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 AC108075.1-201ENST00000424692 529 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 EEF1B2P5-201ENST00000444820 548 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 TCEA1P1-201ENST00000449716 880 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 AC005532.2-201ENST00000467154 373 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 RPS4XP1-201ENST00000482189 787 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 UBA52P7-201ENST00000486088 380 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 SNORA74C-1-201ENST00000580726 201 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 SLC25A36P1-201ENST00000590111 465 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 AC126915.2-201ENST00000610957 190 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 AC009163.6-201ENST00000612367 342 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 MTCO1P46-201ENST00000451639 1491 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 CDY11P-201ENST00000447168 1651 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 RNU1-108P-201ENST00000362556 161 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AL645927.1-201ENST00000396783 406 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AL133270.1-201ENST00000402635 279 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AL021331.1-201ENST00000402817 582 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AL080315.1-201ENST00000406055 466 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC093414.1-201ENST00000434712 514 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AL772161.1-201ENST00000439130 476 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 IGHV5-78-201ENST00000450948 295 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 RPS6P2-201ENST00000454208 705 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 RPSAP50-201ENST00000481955 852 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC072052.1-201ENST00000496556 306 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC231760.1-201ENST00000498002 260 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 RNU6-709P-201ENST00000517257 104 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC130352.1-201ENST00000602979 661 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC068870.2-201ENST00000620635 389 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC019206.1-201ENST00000621938 425 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC243960.7-201ENST00000623532 707 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 AC008758.3-201ENST00000507003 1829 ntBASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC112Q8NEF3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AL356968.2-201ENST00000412769 1257 ntBASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 CBX1P3-201ENST00000413296 527 ntBASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 OR2AM1P-201ENST00000422137 422 ntBASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 KNOP1P3-201ENST00000446933 426 ntBASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AC091544.1-201ENST00000484702 348 ntBASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 RNA5SP392-201ENST00000516905 112 ntBASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AC004948.1-201ENST00000609858 672 ntBASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AL669942.2-201ENST00000620352 697 ntBASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AC087821.1-201ENST00000623639 567 ntBASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC112Q8NEF3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AL121950.1-201ENST00000624993 2077 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 RN7SKP247-201ENST00000411094 308 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms