Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 MIR4505-201ENST00000582238 73 ntBASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 AC087283.1-201ENST00000604029 1074 ntBASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 AC087783.2-201ENST00000605070 562 ntBASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 BX005019.1-201ENST00000561881 1810 ntBASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 TLK1P1-201ENST00000456760 2440 ntBASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 SALL4P2-201ENST00000423288 2910 ntBASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC71LQ8N9Z2 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 MIR7-1-201ENST00000384871 110 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 LRRC37BP1-201ENST00000398851 714 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 ST13P16-201ENST00000401760 781 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AL592291.1-201ENST00000403830 352 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 NUDT19P3-201ENST00000404698 555 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 RPS4XP16-201ENST00000427198 791 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC073052.1-201ENST00000440417 714 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 Z92846.1-201ENST00000456203 268 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 RN7SL517P-201ENST00000462240 305 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 RN7SL799P-201ENST00000475891 298 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 STRADBP1-201ENST00000478954 1281 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 SIAH1P1-201ENST00000479411 923 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 PCNAP1-201ENST00000505363 709 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC006499.4-201ENST00000510947 694 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 HMGB3P13-201ENST00000511263 607 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 Y_RNA.719-201ENST00000517156 106 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 ARGFXP2-201ENST00000579304 949 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 SNX6P1-201ENST00000601728 1224 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AL138895.2-201ENST00000603019 178 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC007620.3-201ENST00000608131 497 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC234782.5-201ENST00000617723 324 ntBASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC71LQ8N9Z2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms