Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHFQ7M4L6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHFQ7M4L6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHFQ7M4L6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHFQ7M4L6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHFQ7M4L6 RNU1-19P-201ENST00000363306 165 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHFQ7M4L6 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHFQ7M4L6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHFQ7M4L6 MTCO3P4-201ENST00000419236 787 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AKR1B10P1-201ENST00000425765 942 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 ETF1P3-201ENST00000430422 1160 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 MTND2P5-201ENST00000432656 1006 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 HMGB3P10-201ENST00000434734 572 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 ELOCP11-201ENST00000436690 332 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 ELOCP13-201ENST00000443934 329 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 ELOCP16-201ENST00000444494 332 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC005297.1-201ENST00000444765 862 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AL358794.1-201ENST00000445689 381 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 RN7SL591P-201ENST00000496150 292 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC026414.1-201ENST00000504046 698 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC147055.3-201ENST00000510547 851 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 EIF3KP3-201ENST00000514461 639 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 RNA5SP271-201ENST00000516700 88 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC100784.1-201ENST00000522790 310 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC079600.1-201ENST00000550326 297 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 MTCYBP23-201ENST00000558717 1102 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC233702.9-201ENST00000581528 203 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AL357094.1-201ENST00000603845 844 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC068313.1-201ENST00000604028 1008 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC087683.2-201ENST00000611384 326 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC109583.2-201ENST00000617367 129 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC008115.4-201ENST00000619780 775 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC073593.1-201ENST00000624500 411 ntBASIC4.84□□□□□ -1.63
SHFQ7M4L6 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.84□□□□□ -1.63
SHFQ7M4L6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SHFQ7M4L6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHFQ7M4L6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.84□□□□□ -1.64
SHFQ7M4L6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHFQ7M4L6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
SHFQ7M4L6 AC114947.2-201ENST00000565748 2125 ntBASIC4.84□□□□□ -1.64
SHFQ7M4L6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHFQ7M4L6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 ZNF849P-201ENST00000594711 1566 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC106872.5-201ENST00000508856 1416 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 RNA5SP433-201ENST00000364491 114 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 MIR142-201ENST00000384835 87 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 HMGB1P20-201ENST00000402555 677 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 HMGB1P13-201ENST00000406019 642 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 RNA5SP296-201ENST00000410523 111 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 RN7SKP286-201ENST00000410894 299 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 USP9YP21-201ENST00000420603 432 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 NANOGP5-201ENST00000424456 877 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 FO393419.3-201ENST00000428741 282 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 RPL34P6-201ENST00000432390 345 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC097499.1-201ENST00000444277 208 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 MTND1P33-201ENST00000446251 917 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 EIF2S2P2-201ENST00000447161 982 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 MTND2P8-201ENST00000450555 1025 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AL450023.1-201ENST00000450868 751 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 GTF2IP12-201ENST00000456547 356 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms