Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AC073052.1-201ENST00000440417 714 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AC010733.1-201ENST00000451515 401 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AL133372.1-201ENST00000493565 745 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 RNU6-551P-201ENST00000516661 103 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AL390334.1-201ENST00000556395 450 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 BGLT3-201ENST00000564523 994 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AC233702.9-201ENST00000581528 203 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 QRSL1P2-201ENST00000418582 964 ntBASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 AC004074.1-201ENST00000421810 1063 ntBASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 NPM1P48-201ENST00000436002 853 ntBASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 AC116562.1-201ENST00000485355 781 ntBASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 OR11I1P-201ENST00000486033 954 ntBASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 AP001960.1-201ENST00000506494 658 ntBASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 AL022401.1-201ENST00000619498 108 ntBASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 AC006840.1-201ENST00000623069 542 ntBASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 AC083843.2-201ENST00000568248 6253 ntBASIC5.07□□□□□ -1.6
RFWD3Q6PCD5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 SNORA73.1-201ENST00000363107 205 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AL034379.1-201ENST00000423216 253 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 MRPL35P2-201ENST00000448009 511 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC000111.2-201ENST00000448200 210 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 FCF1P7-201ENST00000451185 558 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC234781.3-201ENST00000452540 973 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AL356981.1-201ENST00000454879 684 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AL356390.1-201ENST00000455684 397 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC025857.1-201ENST00000525252 377 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC020658.4-201ENST00000613987 684 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC107905.1-201ENST00000616204 426 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC243960.7-201ENST00000623532 707 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 AC068446.1-201ENST00000556425 1549 ntBASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RFWD3Q6PCD5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AC013429.2-201ENST00000418798 781 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 TRGV7-201ENST00000427089 353 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms