Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AC083799.1-201ENST00000366451 910 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 RNU6-225P-201ENST00000384613 103 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 MIR1182-201ENST00000408363 97 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AC009302.1-201ENST00000417147 390 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 SOCS5P3-201ENST00000425115 1576 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AL445528.1-201ENST00000426330 420 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 ZNF733P-202ENST00000444809 1573 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AC099063.2-201ENST00000446360 662 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AL354710.1-201ENST00000453641 246 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 RN7SL809P-201ENST00000482040 297 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 RN7SL629P-201ENST00000489622 285 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 HMGB3P14-201ENST00000494195 599 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 RNA5SP303-201ENST00000516192 130 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AC027308.1-201ENST00000517993 110 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 RPL23AP53-201ENST00000521854 457 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 MIMT1-201ENST00000597105 1050 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AL133406.3-201ENST00000606817 541 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AP005432.2-201ENST00000608162 586 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 AL512624.1-201ENST00000613638 469 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
NIPAL3Q6P499 OR51C1P-202ENST00000641159 1444 ntBASIC4.59□□□□□ -1.67
NIPAL3Q6P499 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.59□□□□□ -1.68
NIPAL3Q6P499 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
NIPAL3Q6P499 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NIPAL3Q6P499 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AL590763.1-201ENST00000398297 1545 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 CIR1P2-201ENST00000514821 1342 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC005522.1-201ENST00000395416 346 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AL078599.1-201ENST00000402075 293 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 NUDT19P3-201ENST00000404698 555 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 NCSTNP1-201ENST00000406229 144 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 RNA5SP296-201ENST00000410523 111 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 RN7SKP222-201ENST00000410651 315 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 RPL34P6-201ENST00000432390 345 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 CNOT7P2-201ENST00000441051 832 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AL157827.1-201ENST00000447622 132 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AL389915.2-201ENST00000454576 441 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC093166.2-201ENST00000455969 1017 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 RNA5SP103-201ENST00000459503 118 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC074386.1-201ENST00000476560 767 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 RN7SL441P-201ENST00000492388 296 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC016550.3-201ENST00000515706 767 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 RNA5SP92-201ENST00000516437 110 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 RNA5SP34-201ENST00000516887 130 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms