Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SNAPC4Q5SXM2 RNA5SP453-201ENST00000362503 119 ntBASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 SNORA62.3-201ENST00000365110 153 ntBASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AC011998.1-201ENST00000433403 117 ntBASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AP000827.1-201ENST00000527814 258 ntBASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 HNRNPCP4-201ENST00000571636 900 ntBASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AC007618.1-201ENST00000366455 732 ntBASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 RPS27AP11-201ENST00000402798 447 ntBASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 QRSL1P2-201ENST00000418582 964 ntBASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 ENPP7P11-201ENST00000505915 627 ntBASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 AC243756.2-201ENST00000618406 463 ntBASIC7.62□□□□□ -1.19
SNAPC4Q5SXM2 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 AL137058.3-201ENST00000624531 3099 ntBASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 RNU6-628P-201ENST00000410675 107 ntBASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 AC133552.1-201ENST00000569988 4007 ntBASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNAPC4Q5SXM2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 ICE2P1-201ENST00000512800 1849 ntBASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 AL627171.1-201ENST00000618845 1308 ntBASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 EIF2AP4-201ENST00000424793 1781 ntBASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 RN7SKP202-201ENST00000410439 330 ntBASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 AL356095.1-201ENST00000417217 199 ntBASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 RPL21P89-201ENST00000444021 467 ntBASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 AL132838.2-201ENST00000492041 314 ntBASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 DSTNP2-201ENST00000504533 515 ntBASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 RNA5SP116-201ENST00000516132 98 ntBASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 Y_RNA.719-201ENST00000517156 106 ntBASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SNAPC4Q5SXM2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 AC008033.1-201ENST00000216407 1162 ntBASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 RNU1-132P-201ENST00000364300 164 ntBASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 ARL4AP5-201ENST00000404372 599 ntBASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 EIF4A1P3-201ENST00000411521 244 ntBASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 VN1R37P-201ENST00000419096 748 ntBASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 COX6CP15-201ENST00000426313 211 ntBASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 AL161756.2-201ENST00000604597 246 ntBASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNAPC4Q5SXM2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.59□□□□□ -1.2
SNAPC4Q5SXM2 AC004817.4-201ENST00000602396 3625 ntBASIC7.59□□□□□ -1.2
SNAPC4Q5SXM2 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.58□□□□□ -1.2
SNAPC4Q5SXM2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNAPC4Q5SXM2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.58□□□□□ -1.2
SNAPC4Q5SXM2 LARP1BP1-201ENST00000506036 1359 ntBASIC7.58□□□□□ -1.2
SNAPC4Q5SXM2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNAPC4Q5SXM2 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.58□□□□□ -1.2
SNAPC4Q5SXM2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms