Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN1BQ07699 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SCN1BQ07699 MTND4P31-201ENST00000425607 1343 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCN1BQ07699 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCN1BQ07699 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.74□□□□□ -1.65
SCN1BQ07699 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCN1BQ07699 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SCN1BQ07699 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SCN1BQ07699 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SCN1BQ07699 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.74□□□□□ -1.65
SCN1BQ07699 RNU6-792P-201ENST00000363490 107 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SCN1BQ07699 RNU2-72P-201ENST00000411175 163 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.74□□□□□ -1.65
SCN1BQ07699 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC005189.1-201ENST00000431286 310 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SCN1BQ07699 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 EEF1A1P1-201ENST00000447052 739 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 CYCSP42-201ENST00000450823 238 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 AL450023.1-201ENST00000450868 751 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 AC022215.1-201ENST00000481770 362 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 RN7SL170P-201ENST00000487098 295 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.74□□□□□ -1.65
SCN1BQ07699 DUTP7-201ENST00000507982 486 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.74□□□□□ -1.65
SCN1BQ07699 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SCN1BQ07699 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC090022.1-201ENST00000546569 311 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.74□□□□□ -1.65
SCN1BQ07699 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.74□□□□□ -1.65
SCN1BQ07699 MTND4LP24-201ENST00000572277 291 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 MIR4716-201ENST00000579628 84 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.74□□□□□ -1.65
SCN1BQ07699 AL138895.2-201ENST00000603019 178 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC025574.2-201ENST00000615621 514 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC123768.4-201ENST00000616244 701 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 AP003072.4-201ENST00000624580 310 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 AC073869.8-201ENST00000641806 335 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SCN1BQ07699 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.74□□□□□ -1.65
SCN1BQ07699 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.74□□□□□ -1.65
SCN1BQ07699 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SCN1BQ07699 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SCN1BQ07699 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SCN1BQ07699 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SCN1BQ07699 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SCN1BQ07699 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SCN1BQ07699 SNORA64.1-201ENST00000362600 132 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SCN1BQ07699 OR7E156P-201ENST00000400303 464 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AL009179.1-201ENST00000406085 265 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 HMGB3P18-201ENST00000406327 590 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AC245060.4-201ENST00000413293 1121 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 MTATP6P19-201ENST00000413797 659 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AC066692.1-201ENST00000421721 457 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN1BQ07699 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN1BQ07699 EIF2S2P3-201ENST00000428356 999 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN1BQ07699 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AC074367.1-201ENST00000438685 1125 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN1BQ07699 HLA-DPA3-207ENST00000454398 229 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AC087672.1-201ENST00000479876 766 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 RPL7P40-201ENST00000481703 745 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 UBA52P3-201ENST00000491303 382 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AC073358.1-201ENST00000505671 684 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AC133963.2-201ENST00000513686 578 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AC022360.1-201ENST00000521058 340 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms