Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 GAS5-AS1-201ENST00000602767 694 ntBASIC4.96□□□□□ -1.62
LTBQ06643 AL365400.2-201ENST00000605604 902 ntBASIC4.96□□□□□ -1.62
LTBQ06643 AC008115.3-201ENST00000614874 549 ntBASIC4.96□□□□□ -1.62
LTBQ06643 AC135068.5-201ENST00000624197 983 ntBASIC4.96□□□□□ -1.62
LTBQ06643 AP002967.1-201ENST00000624203 539 ntBASIC4.96□□□□□ -1.62
LTBQ06643 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LTBQ06643 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 MFSD8-220ENST00000641243 1422 ntBASIC4.96□□□□□ -1.62
LTBQ06643 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LTBQ06643 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.96□□□□□ -1.62
LTBQ06643 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
LTBQ06643 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LTBQ06643 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 LINC01963-201ENST00000562038 3148 ntBASIC4.95□□□□□ -1.62
LTBQ06643 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.95□□□□□ -1.62
LTBQ06643 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 AC112255.1-201ENST00000624070 2493 ntBASIC4.95□□□□□ -1.62
LTBQ06643 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LTBQ06643 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LTBQ06643 RNU6-1331P-201ENST00000363658 106 ntBASIC4.95□□□□□ -1.62
LTBQ06643 RN7SKP28-201ENST00000364770 305 ntBASIC4.95□□□□□ -1.62
LTBQ06643 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.95□□□□□ -1.62
LTBQ06643 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
LTBQ06643 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LTBQ06643 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 GAPDHP42-201ENST00000406848 981 ntBASIC4.95□□□□□ -1.62
LTBQ06643 FAR2P2-201ENST00000413041 594 ntBASIC4.95□□□□□ -1.62
LTBQ06643 RPL35AP24-201ENST00000413846 330 ntBASIC4.95□□□□□ -1.62
LTBQ06643 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.95□□□□□ -1.62
LTBQ06643 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.95□□□□□ -1.62
LTBQ06643 AC241520.1-201ENST00000422654 1099 ntBASIC4.95□□□□□ -1.62
LTBQ06643 FAR2P4-202ENST00000425399 584 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.95□□□□□ -1.62
LTBQ06643 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.95□□□□□ -1.62
LTBQ06643 VN1R54P-201ENST00000435210 1049 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AL590399.4-201ENST00000436561 601 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AC006994.1-201ENST00000438212 839 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AC006466.1-201ENST00000438721 289 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 FAR2P1-206ENST00000449736 709 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AURKAPS1-201ENST00000451805 1212 ntBASIC4.95□□□□□ -1.62
LTBQ06643 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.95□□□□□ -1.62
LTBQ06643 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 RN7SL72P-201ENST00000460697 269 ntBASIC4.95□□□□□ -1.62
LTBQ06643 PSAT1P4-201ENST00000466500 526 ntBASIC4.95□□□□□ -1.62
LTBQ06643 NDUFA5P9-201ENST00000472609 340 ntBASIC4.95□□□□□ -1.62
LTBQ06643 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.95□□□□□ -1.62
LTBQ06643 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 AC112518.2-201ENST00000508565 425 ntBASIC4.95□□□□□ -1.62
LTBQ06643 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.95□□□□□ -1.62
LTBQ06643 AC117522.2-201ENST00000510049 657 ntBASIC4.95□□□□□ -1.62
LTBQ06643 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.95□□□□□ -1.62
LTBQ06643 AC010476.1-201ENST00000519111 851 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AP001207.2-201ENST00000519490 539 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.95□□□□□ -1.62
LTBQ06643 OR8G3P-201ENST00000533406 921 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.95□□□□□ -1.62
LTBQ06643 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.95□□□□□ -1.62
LTBQ06643 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LTBQ06643 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LTBQ06643 EIF1P5-201ENST00000585002 234 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.95□□□□□ -1.62
LTBQ06643 AL022067.1-201ENST00000602426 454 ntBASIC4.95□□□□□ -1.62
LTBQ06643 RNU4-5P-201ENST00000607255 135 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.95□□□□□ -1.62
LTBQ06643 AL096803.3-201ENST00000609032 532 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AC078880.5-201ENST00000617845 421 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AC005840.5-201ENST00000619166 599 ntBASIC4.95□□□□□ -1.62
LTBQ06643 AL669942.2-201ENST00000620352 697 ntBASIC4.95□□□□□ -1.62
LTBQ06643 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.95□□□□□ -1.62
LTBQ06643 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.95□□□□□ -1.62
LTBQ06643 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LTBQ06643 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LTBQ06643 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.95□□□□□ -1.62
LTBQ06643 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LTBQ06643 AC003973.3-201ENST00000624863 2822 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms