Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AL121890.3-201ENST00000618494 516 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC091046.2-201ENST00000620775 665 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC127024.6-201ENST00000621598 424 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.42□□□□□ -1.7
CX3CL1P78423 U6.107-201ENST00000637108 79 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC008691.1-209ENST00000642094 814 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.42□□□□□ -1.7
CX3CL1P78423 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.42□□□□□ -1.7
CX3CL1P78423 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.42□□□□□ -1.7
CX3CL1P78423 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CX3CL1P78423 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.41□□□□□ -1.7
CX3CL1P78423 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CX3CL1P78423 AC092681.1-201ENST00000297369 291 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 RNA5SP122-201ENST00000384457 108 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 MIR551A-201ENST00000385042 96 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 SNORD65C-201ENST00000390962 71 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AL603865.2-201ENST00000401679 213 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 MTATP6P31-201ENST00000406985 692 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 BMS1P17-202ENST00000416720 316 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 AL133173.1-201ENST00000423458 397 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 RIMKLBP2-201ENST00000424737 654 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CX3CL1P78423 RPL7P56-201ENST00000429441 717 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 RPS29P14-201ENST00000431518 171 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AC002504.1-201ENST00000438281 691 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CX3CL1P78423 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.41□□□□□ -1.7
CX3CL1P78423 HMGN1P36-201ENST00000446623 298 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AL606517.1-201ENST00000446914 387 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 IGBP1P3-201ENST00000447449 1000 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.41□□□□□ -1.7
CX3CL1P78423 RN7SL188P-201ENST00000469842 285 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 RPS4XP6-201ENST00000477670 797 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.41□□□□□ -1.7
CX3CL1P78423 GTF2IP9-201ENST00000502460 301 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 UBE2V1P12-201ENST00000503954 474 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AC026414.1-201ENST00000504046 698 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 AC110760.3-202ENST00000515177 371 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 TMEM97P2-201ENST00000517841 403 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.41□□□□□ -1.7
CX3CL1P78423 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 AC021451.1-201ENST00000523498 1129 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 TRIM51DP-201ENST00000529746 596 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.41□□□□□ -1.7
CX3CL1P78423 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 ATP5F1P7-201ENST00000567330 760 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 MIR4505-201ENST00000582238 73 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 MIR7853-201ENST00000584820 132 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CX3CL1P78423 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AL022067.1-201ENST00000602426 454 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CL1P78423 STMN1P1-201ENST00000617809 440 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AC138907.10-201ENST00000623708 983 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.41□□□□□ -1.7
CX3CL1P78423 FRG1EP-201ENST00000634469 770 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CX3CL1P78423 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CX3CL1P78423 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CX3CL1P78423 AC106754.1-201ENST00000562632 1513 ntBASIC4.41□□□□□ -1.7
CX3CL1P78423 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CX3CL1P78423 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CX3CL1P78423 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.41□□□□□ -1.7
CX3CL1P78423 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CL1P78423 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.4□□□□□ -1.7
CX3CL1P78423 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
CX3CL1P78423 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.4□□□□□ -1.7
CX3CL1P78423 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.4□□□□□ -1.7
CX3CL1P78423 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.4□□□□□ -1.7
CX3CL1P78423 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
CX3CL1P78423 DDX18P4-201ENST00000511690 1966 ntBASIC4.4□□□□□ -1.7
CX3CL1P78423 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.4□□□□□ -1.7
CX3CL1P78423 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms