Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.71□□□□□ -1.66
SKP1P63208 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.71□□□□□ -1.66
SKP1P63208 AGGF1P9-201ENST00000561884 913 ntBASIC4.71□□□□□ -1.66
SKP1P63208 MEMO1P5-201ENST00000604810 406 ntBASIC4.71□□□□□ -1.66
SKP1P63208 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SKP1P63208 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SKP1P63208 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.71□□□□□ -1.66
SKP1P63208 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.71□□□□□ -1.66
SKP1P63208 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SKP1P63208 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
SKP1P63208 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SKP1P63208 MAPK10-286ENST00000641208 8747 ntBASIC4.71□□□□□ -1.66
SKP1P63208 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SKP1P63208 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.7□□□□□ -1.66
SKP1P63208 SMG1P6-201ENST00000532337 2930 ntBASIC4.7□□□□□ -1.66
SKP1P63208 AC011755.1-201ENST00000623763 2049 ntBASIC4.7□□□□□ -1.66
SKP1P63208 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SKP1P63208 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SKP1P63208 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SKP1P63208 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.7□□□□□ -1.66
SKP1P63208 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SKP1P63208 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SKP1P63208 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SKP1P63208 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
SKP1P63208 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.7□□□□□ -1.66
SKP1P63208 U3.32-201ENST00000408116 212 ntBASIC4.7□□□□□ -1.66
SKP1P63208 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.7□□□□□ -1.66
SKP1P63208 CHEK2P3-201ENST00000416118 248 ntBASIC4.7□□□□□ -1.66
SKP1P63208 AC006455.6-201ENST00000426192 893 ntBASIC4.7□□□□□ -1.66
SKP1P63208 AL450023.3-201ENST00000440592 271 ntBASIC4.7□□□□□ -1.66
SKP1P63208 RPL34P20-201ENST00000442771 351 ntBASIC4.7□□□□□ -1.66
SKP1P63208 PTMAP3-201ENST00000447474 330 ntBASIC4.7□□□□□ -1.66
SKP1P63208 TRY2P-201ENST00000448860 689 ntBASIC4.7□□□□□ -1.66
SKP1P63208 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.7□□□□□ -1.66
SKP1P63208 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.7□□□□□ -1.66
SKP1P63208 AC245028.2-201ENST00000458673 253 ntBASIC4.7□□□□□ -1.66
SKP1P63208 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.7□□□□□ -1.66
SKP1P63208 NIFKP7-201ENST00000503365 834 ntBASIC4.7□□□□□ -1.66
SKP1P63208 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.7□□□□□ -1.66
SKP1P63208 NDUFB5P1-201ENST00000508134 564 ntBASIC4.7□□□□□ -1.66
SKP1P63208 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.7□□□□□ -1.66
SKP1P63208 RNA5SP228-201ENST00000516232 133 ntBASIC4.7□□□□□ -1.66
SKP1P63208 HMGB1P19-201ENST00000517578 577 ntBASIC4.7□□□□□ -1.66
SKP1P63208 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.7□□□□□ -1.66
SKP1P63208 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.7□□□□□ -1.66
SKP1P63208 AC011840.5-201ENST00000582125 771 ntBASIC4.7□□□□□ -1.66
SKP1P63208 AP000919.1-201ENST00000582850 985 ntBASIC4.7□□□□□ -1.66
SKP1P63208 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.7□□□□□ -1.66
SKP1P63208 AC133552.5-201ENST00000604266 540 ntBASIC4.7□□□□□ -1.66
SKP1P63208 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.7□□□□□ -1.66
SKP1P63208 MIR6719-201ENST00000622428 87 ntBASIC4.7□□□□□ -1.66
SKP1P63208 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SKP1P63208 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.7□□□□□ -1.66
SKP1P63208 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SKP1P63208 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SKP1P63208 ZNF652P1-201ENST00000442420 1309 ntBASIC4.7□□□□□ -1.66
SKP1P63208 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SKP1P63208 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
SKP1P63208 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SKP1P63208 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SKP1P63208 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
SKP1P63208 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
SKP1P63208 RNU6-178P-201ENST00000384631 104 ntBASIC4.69□□□□□ -1.66
SKP1P63208 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SKP1P63208 AL133270.1-201ENST00000402635 279 ntBASIC4.69□□□□□ -1.66
SKP1P63208 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.69□□□□□ -1.66
SKP1P63208 AF186996.5-201ENST00000418098 904 ntBASIC4.69□□□□□ -1.66
SKP1P63208 RPL12P43-201ENST00000420608 499 ntBASIC4.69□□□□□ -1.66
SKP1P63208 AC104333.2-201ENST00000422630 192 ntBASIC4.69□□□□□ -1.66
SKP1P63208 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.69□□□□□ -1.66
SKP1P63208 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.69□□□□□ -1.66
SKP1P63208 AP000936.3-201ENST00000438127 255 ntBASIC4.69□□□□□ -1.66
SKP1P63208 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.69□□□□□ -1.66
SKP1P63208 AL691482.1-201ENST00000453255 87 ntBASIC4.69□□□□□ -1.66
SKP1P63208 AL133244.1-201ENST00000456007 258 ntBASIC4.69□□□□□ -1.66
SKP1P63208 TPT1P1-201ENST00000458495 518 ntBASIC4.69□□□□□ -1.66
SKP1P63208 snoU13.20-201ENST00000459180 104 ntBASIC4.69□□□□□ -1.66
SKP1P63208 TRBV8-1-201ENST00000481590 279 ntBASIC4.69□□□□□ -1.66
SKP1P63208 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SKP1P63208 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.69□□□□□ -1.66
SKP1P63208 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.69□□□□□ -1.66
SKP1P63208 AP001922.4-201ENST00000526967 290 ntBASIC4.69□□□□□ -1.66
SKP1P63208 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.69□□□□□ -1.66
SKP1P63208 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.69□□□□□ -1.66
SKP1P63208 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SKP1P63208 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.69□□□□□ -1.66
SKP1P63208 AC104687.2-201ENST00000604442 342 ntBASIC4.69□□□□□ -1.66
SKP1P63208 AC023813.4-201ENST00000607580 580 ntBASIC4.69□□□□□ -1.66
SKP1P63208 AL021707.7-201ENST00000607991 416 ntBASIC4.69□□□□□ -1.66
SKP1P63208 AL135786.2-201ENST00000608422 615 ntBASIC4.69□□□□□ -1.66
SKP1P63208 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
SKP1P63208 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.69□□□□□ -1.66
SKP1P63208 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
SKP1P63208 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
SKP1P63208 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.69□□□□□ -1.66
SKP1P63208 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SKP1P63208 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.69□□□□□ -1.66
SKP1P63208 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SKP1P63208 LINC01109-201ENST00000603837 3081 ntBASIC4.69□□□□□ -1.66
SKP1P63208 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms