Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC021006.3-201ENST00000530771 192 ntBASIC4.23□□□□□ -1.73
LMO4P61968 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.23□□□□□ -1.73
LMO4P61968 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.23□□□□□ -1.73
LMO4P61968 MTND3P12-201ENST00000559068 328 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.23□□□□□ -1.73
LMO4P61968 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.23□□□□□ -1.73
LMO4P61968 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.23□□□□□ -1.73
LMO4P61968 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.23□□□□□ -1.73
LMO4P61968 AC091057.3-201ENST00000602684 733 ntBASIC4.23□□□□□ -1.73
LMO4P61968 MIR6820-201ENST00000611508 62 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AL445493.3-201ENST00000619568 477 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.23□□□□□ -1.73
LMO4P61968 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.23□□□□□ -1.73
LMO4P61968 AC099654.8-201ENST00000637757 681 ntBASIC4.23□□□□□ -1.73
LMO4P61968 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.23□□□□□ -1.73
LMO4P61968 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LMO4P61968 AC016745.2-201ENST00000608834 3443 ntBASIC4.23□□□□□ -1.73
LMO4P61968 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LMO4P61968 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.23□□□□□ -1.73
LMO4P61968 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 AC068870.3-201ENST00000625077 2536 ntBASIC4.23□□□□□ -1.73
LMO4P61968 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LMO4P61968 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.23□□□□□ -1.73
LMO4P61968 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LMO4P61968 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.22□□□□□ -1.73
LMO4P61968 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
LMO4P61968 AC106754.1-201ENST00000562632 1513 ntBASIC4.22□□□□□ -1.73
LMO4P61968 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.22□□□□□ -1.73
LMO4P61968 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LMO4P61968 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.22□□□□□ -1.73
LMO4P61968 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LMO4P61968 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 RN7SKP115-201ENST00000363177 317 ntBASIC4.22□□□□□ -1.73
LMO4P61968 RN7SKP113-201ENST00000363891 295 ntBASIC4.22□□□□□ -1.73
LMO4P61968 RNA5SP87-201ENST00000384155 118 ntBASIC4.22□□□□□ -1.73
LMO4P61968 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LMO4P61968 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LMO4P61968 AMZ2P2-201ENST00000406819 1057 ntBASIC4.22□□□□□ -1.73
LMO4P61968 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LMO4P61968 RN7SKP216-201ENST00000411050 312 ntBASIC4.22□□□□□ -1.73
LMO4P61968 Y_RNA.625-201ENST00000411256 107 ntBASIC4.22□□□□□ -1.73
LMO4P61968 RPA2P2-201ENST00000419698 796 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC073464.3-201ENST00000422564 712 ntBASIC4.22□□□□□ -1.73
LMO4P61968 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.22□□□□□ -1.73
LMO4P61968 AL445528.1-201ENST00000426330 420 ntBASIC4.22□□□□□ -1.73
LMO4P61968 USP9YP9-201ENST00000429406 715 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.22□□□□□ -1.73
LMO4P61968 RPL19P16-201ENST00000433839 588 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC004854.1-201ENST00000440356 349 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.22□□□□□ -1.73
LMO4P61968 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.22□□□□□ -1.73
LMO4P61968 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.22□□□□□ -1.73
LMO4P61968 AC108729.2-201ENST00000476543 840 ntBASIC4.22□□□□□ -1.73
LMO4P61968 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.22□□□□□ -1.73
LMO4P61968 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.22□□□□□ -1.73
LMO4P61968 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.22□□□□□ -1.73
LMO4P61968 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.22□□□□□ -1.73
LMO4P61968 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 AC092868.3-201ENST00000560515 784 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 AC009117.1-201ENST00000563948 554 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC079148.1-201ENST00000565944 819 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.22□□□□□ -1.73
LMO4P61968 VN1R87P-201ENST00000596706 487 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.22□□□□□ -1.73
LMO4P61968 LSM1P2-201ENST00000604911 322 ntBASIC4.22□□□□□ -1.73
LMO4P61968 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LMO4P61968 AC005156.1-201ENST00000613371 573 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC007786.3-201ENST00000615154 596 ntBASIC4.22□□□□□ -1.73
LMO4P61968 MIR6839-201ENST00000620425 113 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC120349.3-201ENST00000624377 529 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.22□□□□□ -1.73
LMO4P61968 AC004808.1-201ENST00000627671 721 ntBASIC4.22□□□□□ -1.73
LMO4P61968 AC013437.2-201ENST00000639587 677 ntBASIC4.22□□□□□ -1.73
LMO4P61968 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LMO4P61968 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LMO4P61968 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LMO4P61968 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
LMO4P61968 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LMO4P61968 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LMO4P61968 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
LMO4P61968 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.22□□□□□ -1.73
LMO4P61968 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LMO4P61968 AP002512.4-202ENST00000641599 4530 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms