Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN20P56880 AL591438.1-201ENST00000433508 581 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN20P56880 AL672138.1-201ENST00000450604 1015 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AL606490.1-201ENST00000452266 765 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLDN20P56880 OR2AO1P-201ENST00000476497 403 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC107398.1-201ENST00000486904 505 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 RN7SL629P-201ENST00000489622 285 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 PGAM1P13-201ENST00000507497 754 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC021106.1-201ENST00000509020 1058 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 RN7SKP141-201ENST00000516167 338 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC010476.1-201ENST00000519111 851 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN20P56880 HMGB1P40-201ENST00000525121 540 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AP003066.2-201ENST00000529375 555 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN20P56880 AL049870.4-201ENST00000555741 486 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.87□□□□□ -1.63
CLDN20P56880 MIR1269B-201ENST00000580405 75 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN20P56880 AC096947.1-201ENST00000603233 470 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC034236.3-201ENST00000605999 461 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC034229.4-201ENST00000607861 441 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN20P56880 AC010608.3-201ENST00000625048 527 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AP003485.1-201ENST00000625093 753 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN20P56880 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN20P56880 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLDN20P56880 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN20P56880 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLDN20P56880 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN20P56880 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN20P56880 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN20P56880 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN20P56880 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN20P56880 AC007996.1-201ENST00000620414 2821 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN20P56880 RNA5SP183-201ENST00000362452 119 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN20P56880 RNU6-171P-201ENST00000384354 107 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 SNORA48.4-201ENST00000391089 134 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 RPL22P22-201ENST00000395439 379 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 HMGB3P19-201ENST00000403971 560 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AL355615.1-201ENST00000406187 641 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 MIR1286-201ENST00000408112 78 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.86□□□□□ -1.63
CLDN20P56880 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 BX510359.3-201ENST00000422168 306 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AL355433.1-201ENST00000422804 300 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 NANOGP4-201ENST00000427230 913 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 RPL12P17-201ENST00000432393 498 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 FTLP19-201ENST00000433300 394 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN20P56880 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 AC090804.1-201ENST00000448870 490 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN20P56880 RNA5SP103-201ENST00000459503 118 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC110749.1-201ENST00000462007 357 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC092754.1-201ENST00000472975 479 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 COPS8P2-201ENST00000473228 627 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 CBX1P5-201ENST00000475330 559 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 RN7SL177P-201ENST00000476596 299 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 RPL21P47-201ENST00000483696 477 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 RN7SL447P-201ENST00000494711 245 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC025459.1-201ENST00000504072 156 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC024558.1-201ENST00000505008 528 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN20P56880 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN20P56880 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN20P56880 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN20P56880 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 OR8G3P-201ENST00000533406 921 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC027369.5-201ENST00000533838 755 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AP000916.1-201ENST00000533869 835 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC087894.1-201ENST00000538359 518 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLDN20P56880 OR11H3P-201ENST00000554547 982 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC106734.1-201ENST00000568646 663 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN20P56880 AC006272.2-201ENST00000594725 163 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 RPAP2P1-201ENST00000603626 1168 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC109583.2-201ENST00000617367 129 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC135068.5-201ENST00000624197 983 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 OR4G3P-201ENST00000633500 913 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms