Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 COX4I1P2-201ENST00000447446 547 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 HMGB1P4-201ENST00000455362 567 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 RPL7AP52-201ENST00000458096 790 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
GFRA1P56159 RN7SL741P-201ENST00000482473 289 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 MTAPP1-201ENST00000489154 819 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AC138853.1-201ENST00000503549 823 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.83□□□□□ -1.48
GFRA1P56159 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 RNA5SP418-201ENST00000515951 117 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 RNA5SP216-201ENST00000516111 123 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 SCARNA6.1-201ENST00000516989 238 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.83□□□□□ -1.48
GFRA1P56159 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.83□□□□□ -1.48
GFRA1P56159 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.83□□□□□ -1.48
GFRA1P56159 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.83□□□□□ -1.48
GFRA1P56159 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 RN7SL230P-201ENST00000580835 303 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 KPNA2P3-201ENST00000584190 848 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AC005771.1-201ENST00000585581 349 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
GFRA1P56159 AC139493.1-201ENST00000604368 397 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AC069304.2-201ENST00000605154 435 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AC006566.1-201ENST00000608943 513 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AC116651.1-201ENST00000609724 556 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AL357080.1-201ENST00000617394 239 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 AL122023.1-201ENST00000622847 530 ntBASIC5.83□□□□□ -1.48
GFRA1P56159 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
GFRA1P56159 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA1P56159 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA1P56159 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA1P56159 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 RBPJP2-201ENST00000618187 1444 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
GFRA1P56159 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 SAGE3P-201ENST00000619800 1635 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.82□□□□□ -1.48
GFRA1P56159 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 LPAL2-203ENST00000454031 2498 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 OR9G4-201ENST00000302957 984 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 RNA5SP188-201ENST00000362916 129 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.82□□□□□ -1.48
GFRA1P56159 RNU6-723P-201ENST00000383973 107 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 RN7SKP281-201ENST00000410472 352 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AC017035.1-201ENST00000411999 1115 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.82□□□□□ -1.48
GFRA1P56159 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.82□□□□□ -1.48
GFRA1P56159 NIPA2P1-201ENST00000426223 976 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 MTCO3P21-201ENST00000430791 643 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AL139415.2-201ENST00000431968 163 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.82□□□□□ -1.48
GFRA1P56159 BMS1P19-201ENST00000433925 393 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 B3GNT2P1-201ENST00000434960 952 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AC004865.1-201ENST00000442276 1003 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AL512593.1-201ENST00000444758 779 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 RPL26P28-201ENST00000451325 435 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.82□□□□□ -1.48
GFRA1P56159 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.82□□□□□ -1.48
GFRA1P56159 GM2AP2-201ENST00000491764 562 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 RPS27P20-201ENST00000492051 246 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.82□□□□□ -1.48
GFRA1P56159 SNORA58-201ENST00000505219 137 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.82□□□□□ -1.48
GFRA1P56159 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.82□□□□□ -1.48
GFRA1P56159 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.82□□□□□ -1.48
GFRA1P56159 IGLVIV-64-201ENST00000518581 301 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 NPM1P6-201ENST00000521088 871 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AF279873.1-201ENST00000523393 313 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 CYCSP25-201ENST00000525280 316 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.82□□□□□ -1.48
GFRA1P56159 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.82□□□□□ -1.48
GFRA1P56159 NANOGNBP2-201ENST00000544753 553 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AC008055.1-201ENST00000547032 609 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms