Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
PKNOX1P55347 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.72□□□□□ -1.65
PKNOX1P55347 AC011445.2-201ENST00000599274 173 ntBASIC4.72□□□□□ -1.65
PKNOX1P55347 AC124856.1-201ENST00000600819 896 ntBASIC4.72□□□□□ -1.65
PKNOX1P55347 AC010424.2-201ENST00000607594 443 ntBASIC4.72□□□□□ -1.65
PKNOX1P55347 AL159169.2-201ENST00000610061 1269 ntBASIC4.72□□□□□ -1.65
PKNOX1P55347 uc_338.18-201ENST00000615451 175 ntBASIC4.72□□□□□ -1.65
PKNOX1P55347 AL121890.2-201ENST00000617644 465 ntBASIC4.72□□□□□ -1.65
PKNOX1P55347 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PKNOX1P55347 PABPC1P6-201ENST00000445594 1829 ntBASIC4.72□□□□□ -1.65
PKNOX1P55347 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.72□□□□□ -1.65
PKNOX1P55347 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.72□□□□□ -1.65
PKNOX1P55347 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
PKNOX1P55347 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PKNOX1P55347 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PKNOX1P55347 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
PKNOX1P55347 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.71□□□□□ -1.66
PKNOX1P55347 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PKNOX1P55347 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PKNOX1P55347 RNA5SP428-201ENST00000365129 132 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 AL672167.2-201ENST00000377164 879 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.71□□□□□ -1.66
PKNOX1P55347 AP000534.2-201ENST00000412729 568 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.71□□□□□ -1.66
PKNOX1P55347 AC106901.1-201ENST00000425086 698 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 AL391987.1-201ENST00000441025 200 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.71□□□□□ -1.66
PKNOX1P55347 RPL23AP37-201ENST00000479658 549 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 RN7SL319P-201ENST00000480656 221 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PKNOX1P55347 AGGF1P3-201ENST00000493675 1213 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.71□□□□□ -1.66
PKNOX1P55347 IGLVIV-64-201ENST00000518581 301 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.71□□□□□ -1.66
PKNOX1P55347 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PKNOX1P55347 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.71□□□□□ -1.66
PKNOX1P55347 AC022832.1-201ENST00000530718 645 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PKNOX1P55347 AC092490.3-201ENST00000545370 572 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.71□□□□□ -1.66
PKNOX1P55347 AL353600.1-201ENST00000608148 251 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 AP000864.1-201ENST00000609424 650 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 AC234782.5-201ENST00000617723 324 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 AC092435.4-201ENST00000623012 4159 ntBASIC4.71□□□□□ -1.66
PKNOX1P55347 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PKNOX1P55347 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PKNOX1P55347 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.71□□□□□ -1.66
PKNOX1P55347 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKNOX1P55347 AL606537.1-201ENST00000607258 2011 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKNOX1P55347 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.7□□□□□ -1.66
PKNOX1P55347 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 Y_RNA.62-201ENST00000362840 99 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 RNA5SP455-201ENST00000365190 119 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKNOX1P55347 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.7□□□□□ -1.66
PKNOX1P55347 AL391361.1-201ENST00000405580 489 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.7□□□□□ -1.66
PKNOX1P55347 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.7□□□□□ -1.66
PKNOX1P55347 RPS27P18-201ENST00000431701 247 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.7□□□□□ -1.66
PKNOX1P55347 CNOT7P2-201ENST00000441051 832 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 AL163193.1-201ENST00000444895 788 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 RPS6P2-201ENST00000454208 705 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 OR7L1P-201ENST00000456181 380 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.7□□□□□ -1.66
PKNOX1P55347 DEFB109F-201ENST00000491870 277 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 RN7SL101P-201ENST00000496350 279 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.7□□□□□ -1.66
PKNOX1P55347 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.7□□□□□ -1.66
PKNOX1P55347 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.7□□□□□ -1.66
PKNOX1P55347 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.7□□□□□ -1.66
PKNOX1P55347 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.7□□□□□ -1.66
PKNOX1P55347 AP001804.2-201ENST00000533932 910 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.7□□□□□ -1.66
PKNOX1P55347 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.7□□□□□ -1.66
PKNOX1P55347 OR11J2P-201ENST00000555298 907 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PKNOX1P55347 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.7□□□□□ -1.66
PKNOX1P55347 AC012146.2-201ENST00000576545 416 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 AP001542.1-201ENST00000591314 200 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.7□□□□□ -1.66
PKNOX1P55347 AC005086.4-201ENST00000623065 213 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.7□□□□□ -1.66
PKNOX1P55347 AC004808.2-201ENST00000627965 773 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.7□□□□□ -1.66
PKNOX1P55347 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKNOX1P55347 AC000123.3-201ENST00000624029 4975 ntBASIC4.7□□□□□ -1.66
PKNOX1P55347 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKNOX1P55347 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PKNOX1P55347 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PKNOX1P55347 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKNOX1P55347 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.69□□□□□ -1.66
PKNOX1P55347 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.69□□□□□ -1.66
PKNOX1P55347 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.69□□□□□ -1.66
PKNOX1P55347 MAPK10-286ENST00000641208 8747 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.69□□□□□ -1.66
PKNOX1P55347 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms