Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5□□□□□ -1.61
CDH13P55290 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 SIAH1P1-201ENST00000479411 923 ntBASIC5□□□□□ -1.61
CDH13P55290 AC107398.1-201ENST00000486904 505 ntBASIC5□□□□□ -1.61
CDH13P55290 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5□□□□□ -1.61
CDH13P55290 AC025459.1-201ENST00000504072 156 ntBASIC5□□□□□ -1.61
CDH13P55290 RPS4XP20-201ENST00000505751 772 ntBASIC5□□□□□ -1.61
CDH13P55290 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5□□□□□ -1.61
CDH13P55290 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5□□□□□ -1.61
CDH13P55290 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5□□□□□ -1.61
CDH13P55290 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5□□□□□ -1.61
CDH13P55290 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5□□□□□ -1.61
CDH13P55290 RNU6-1004P-201ENST00000516584 111 ntBASIC5□□□□□ -1.61
CDH13P55290 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5□□□□□ -1.61
CDH13P55290 HIGD1AP18-201ENST00000520730 278 ntBASIC5□□□□□ -1.61
CDH13P55290 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5□□□□□ -1.61
CDH13P55290 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 SNORD95-201ENST00000579879 68 ntBASIC5□□□□□ -1.61
CDH13P55290 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5□□□□□ -1.61
CDH13P55290 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5□□□□□ -1.61
CDH13P55290 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5□□□□□ -1.61
CDH13P55290 AL589674.2-201ENST00000604304 337 ntBASIC5□□□□□ -1.61
CDH13P55290 AC025175.1-201ENST00000606482 759 ntBASIC5□□□□□ -1.61
CDH13P55290 AC109309.2-201ENST00000612597 332 ntBASIC5□□□□□ -1.61
CDH13P55290 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5□□□□□ -1.61
CDH13P55290 AL163051.2-201ENST00000618976 735 ntBASIC5□□□□□ -1.61
CDH13P55290 BX005214.3-202ENST00000619809 325 ntBASIC5□□□□□ -1.61
CDH13P55290 AC020978.9-201ENST00000624380 1141 ntBASIC5□□□□□ -1.61
CDH13P55290 AC136428.4-201ENST00000634254 1155 ntBASIC5□□□□□ -1.61
CDH13P55290 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
CDH13P55290 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5□□□□□ -1.61
CDH13P55290 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5□□□□□ -1.61
CDH13P55290 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CDH13P55290 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CDH13P55290 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5□□□□□ -1.61
CDH13P55290 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH13P55290 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5□□□□□ -1.61
CDH13P55290 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH13P55290 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.99□□□□□ -1.61
CDH13P55290 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH13P55290 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH13P55290 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH13P55290 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH13P55290 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH13P55290 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH13P55290 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH13P55290 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH13P55290 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH13P55290 AC009804.1-201ENST00000400949 179 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH13P55290 AC013429.2-201ENST00000418798 781 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH13P55290 RPS4XP16-201ENST00000427198 791 ntBASIC4.99□□□□□ -1.61
CDH13P55290 COX6CP13-201ENST00000428703 226 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH13P55290 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH13P55290 TPT1P1-201ENST00000458495 518 ntBASIC4.99□□□□□ -1.61
CDH13P55290 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AC091180.1-201ENST00000462104 372 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH13P55290 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH13P55290 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH13P55290 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 AC092451.2-201ENST00000538746 658 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH13P55290 AL390334.1-201ENST00000556395 450 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 AC018552.1-201ENST00000562099 811 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 TMF1P1-201ENST00000576058 373 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AC011840.5-201ENST00000582125 771 ntBASIC4.99□□□□□ -1.61
CDH13P55290 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH13P55290 SS18L2P2-201ENST00000583960 235 ntBASIC4.99□□□□□ -1.61
CDH13P55290 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 AC069307.1-201ENST00000602820 447 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH13P55290 AP005432.2-201ENST00000608162 586 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AC110792.4-201ENST00000609843 298 ntBASIC4.99□□□□□ -1.61
CDH13P55290 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH13P55290 AC011472.4-201ENST00000615848 491 ntBASIC4.99□□□□□ -1.61
CDH13P55290 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.99□□□□□ -1.61
CDH13P55290 AC103798.2-201ENST00000624292 632 ntBASIC4.99□□□□□ -1.61
CDH13P55290 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 AC135068.12-201ENST00000637370 931 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms