Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNA5SP87-201ENST00000384155 118 ntBASIC5□□□□□ -1.61
CDH4P55283 SNORA11B-201ENST00000408175 129 ntBASIC5□□□□□ -1.61
CDH4P55283 AL139128.1-201ENST00000413921 941 ntBASIC5□□□□□ -1.61
CDH4P55283 AC008072.1-201ENST00000434254 824 ntBASIC5□□□□□ -1.61
CDH4P55283 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5□□□□□ -1.61
CDH4P55283 AC002553.2-201ENST00000453217 340 ntBASIC5□□□□□ -1.61
CDH4P55283 MTCYBP14-201ENST00000457471 715 ntBASIC5□□□□□ -1.61
CDH4P55283 COX6B1P2-201ENST00000489624 230 ntBASIC5□□□□□ -1.61
CDH4P55283 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 SNORD116-30-201ENST00000516468 85 ntBASIC5□□□□□ -1.61
CDH4P55283 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5□□□□□ -1.61
CDH4P55283 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5□□□□□ -1.61
CDH4P55283 LSM3P2-201ENST00000551246 273 ntBASIC5□□□□□ -1.61
CDH4P55283 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CDH4P55283 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5□□□□□ -1.61
CDH4P55283 SNORA74C-1-201ENST00000580726 201 ntBASIC5□□□□□ -1.61
CDH4P55283 MIR3667-201ENST00000581025 74 ntBASIC5□□□□□ -1.61
CDH4P55283 MIR4480-201ENST00000582492 71 ntBASIC5□□□□□ -1.61
CDH4P55283 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5□□□□□ -1.61
CDH4P55283 AC091953.3-201ENST00000623220 236 ntBASIC5□□□□□ -1.61
CDH4P55283 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5□□□□□ -1.61
CDH4P55283 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5□□□□□ -1.61
CDH4P55283 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5□□□□□ -1.61
CDH4P55283 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CDH4P55283 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
CDH4P55283 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CDH4P55283 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH4P55283 AC133552.1-201ENST00000569988 4007 ntBASIC4.99□□□□□ -1.61
CDH4P55283 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
CDH4P55283 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH4P55283 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH4P55283 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CDH4P55283 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH4P55283 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH4P55283 RNU6-729P-201ENST00000384399 107 ntBASIC4.99□□□□□ -1.61
CDH4P55283 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH4P55283 AL035419.1-201ENST00000397037 564 ntBASIC4.99□□□□□ -1.61
CDH4P55283 RNA5SP113-201ENST00000410486 84 ntBASIC4.99□□□□□ -1.61
CDH4P55283 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH4P55283 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH4P55283 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH4P55283 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH4P55283 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH4P55283 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH4P55283 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH4P55283 OR1H1P-201ENST00000448731 937 ntBASIC4.99□□□□□ -1.61
CDH4P55283 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH4P55283 AC107015.1-201ENST00000466902 747 ntBASIC4.99□□□□□ -1.61
CDH4P55283 AC105233.1-201ENST00000498840 781 ntBASIC4.99□□□□□ -1.61
CDH4P55283 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH4P55283 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH4P55283 BUD31P1-201ENST00000521828 359 ntBASIC4.99□□□□□ -1.61
CDH4P55283 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH4P55283 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH4P55283 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH4P55283 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH4P55283 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH4P55283 AL049839.1-201ENST00000556151 657 ntBASIC4.99□□□□□ -1.61
CDH4P55283 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH4P55283 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH4P55283 BNIP3P32-201ENST00000600015 554 ntBASIC4.99□□□□□ -1.61
CDH4P55283 AL121932.1-201ENST00000605542 214 ntBASIC4.99□□□□□ -1.61
CDH4P55283 AC004948.1-201ENST00000609858 672 ntBASIC4.99□□□□□ -1.61
CDH4P55283 AL022401.1-201ENST00000619498 108 ntBASIC4.99□□□□□ -1.61
CDH4P55283 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH4P55283 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH4P55283 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH4P55283 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH4P55283 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CDH4P55283 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH4P55283 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.99□□□□□ -1.61
CDH4P55283 AC021242.1-201ENST00000507315 2035 ntBASIC4.99□□□□□ -1.61
CDH4P55283 SMG1P6-201ENST00000532337 2930 ntBASIC4.99□□□□□ -1.61
CDH4P55283 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH4P55283 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH4P55283 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH4P55283 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CDH4P55283 AC009643.2-201ENST00000603543 1448 ntBASIC4.98□□□□□ -1.61
CDH4P55283 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
CDH4P55283 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CDH4P55283 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH4P55283 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH4P55283 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CDH4P55283 MIR937-201ENST00000401271 86 ntBASIC4.98□□□□□ -1.61
CDH4P55283 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH4P55283 AL360081.1-201ENST00000428299 555 ntBASIC4.98□□□□□ -1.61
CDH4P55283 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH4P55283 RPS5P7-201ENST00000456664 608 ntBASIC4.98□□□□□ -1.61
CDH4P55283 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH4P55283 AC069304.1-201ENST00000491593 704 ntBASIC4.98□□□□□ -1.61
CDH4P55283 RN7SL558P-201ENST00000497468 299 ntBASIC4.98□□□□□ -1.61
CDH4P55283 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH4P55283 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms