Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SNORA64.1-201ENST00000362600 132 ntBASIC5.79□□□□□ -1.48
NEK3P51956 SNORA51.12-201ENST00000384448 134 ntBASIC5.79□□□□□ -1.48
NEK3P51956 MIR143-201ENST00000385300 106 ntBASIC5.79□□□□□ -1.48
NEK3P51956 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.79□□□□□ -1.48
NEK3P51956 ZNF602P-201ENST00000405929 924 ntBASIC5.79□□□□□ -1.48
NEK3P51956 SNORA11C-201ENST00000408532 129 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AL513325.1-201ENST00000417716 1034 ntBASIC5.79□□□□□ -1.48
NEK3P51956 OR10T1P-201ENST00000424327 947 ntBASIC5.79□□□□□ -1.48
NEK3P51956 NPM1P24-201ENST00000428039 894 ntBASIC5.79□□□□□ -1.48
NEK3P51956 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 TPTE2P6-202ENST00000445572 1007 ntBASIC5.79□□□□□ -1.48
NEK3P51956 EEF1B2P6-201ENST00000445713 673 ntBASIC5.79□□□□□ -1.48
NEK3P51956 RANP1-206ENST00000455094 651 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AC104164.3-201ENST00000467363 1258 ntBASIC5.79□□□□□ -1.48
NEK3P51956 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.79□□□□□ -1.48
NEK3P51956 AC023050.1-201ENST00000498198 304 ntBASIC5.79□□□□□ -1.48
NEK3P51956 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 AC105384.2-201ENST00000508433 640 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.79□□□□□ -1.48
NEK3P51956 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 RNU6-415P-201ENST00000516252 97 ntBASIC5.79□□□□□ -1.48
NEK3P51956 RNU6-1028P-201ENST00000517164 93 ntBASIC5.79□□□□□ -1.48
NEK3P51956 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.79□□□□□ -1.48
NEK3P51956 AC021678.3-201ENST00000517893 476 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AC139365.2-201ENST00000517972 253 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.79□□□□□ -1.48
NEK3P51956 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 DPPA2P4-201ENST00000563717 878 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AC023824.3-201ENST00000569003 562 ntBASIC5.79□□□□□ -1.48
NEK3P51956 SNORD95-201ENST00000579879 68 ntBASIC5.79□□□□□ -1.48
NEK3P51956 RN7SL339P-201ENST00000580597 296 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 NTAN1P1-201ENST00000603150 646 ntBASIC5.79□□□□□ -1.48
NEK3P51956 Z82195.1-201ENST00000604558 398 ntBASIC5.79□□□□□ -1.48
NEK3P51956 NANOGP3-201ENST00000605855 286 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AC013468.1-201ENST00000608680 598 ntBASIC5.79□□□□□ -1.48
NEK3P51956 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AL691477.1-201ENST00000624398 162 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AL390318.1-201ENST00000624564 687 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AC116563.2-201ENST00000624751 535 ntBASIC5.79□□□□□ -1.48
NEK3P51956 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.79□□□□□ -1.48
NEK3P51956 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEK3P51956 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NEK3P51956 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.78□□□□□ -1.48
NEK3P51956 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
NEK3P51956 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 AL159987.1-201ENST00000347911 293 ntBASIC5.78□□□□□ -1.48
NEK3P51956 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.78□□□□□ -1.48
NEK3P51956 SNORA51.1-201ENST00000363243 140 ntBASIC5.78□□□□□ -1.48
NEK3P51956 RNA5SP187-201ENST00000384400 119 ntBASIC5.78□□□□□ -1.48
NEK3P51956 RNU6-178P-201ENST00000384631 104 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.78□□□□□ -1.48
NEK3P51956 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.78□□□□□ -1.48
NEK3P51956 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AC079355.1-201ENST00000421770 223 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AC009965.2-201ENST00000425328 970 ntBASIC5.78□□□□□ -1.48
NEK3P51956 VN1R21P-201ENST00000426703 765 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AL121776.1-201ENST00000429337 372 ntBASIC5.78□□□□□ -1.48
NEK3P51956 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.78□□□□□ -1.48
NEK3P51956 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 ACTR3P2-201ENST00000439585 1257 ntBASIC5.78□□□□□ -1.48
NEK3P51956 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.78□□□□□ -1.48
NEK3P51956 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.78□□□□□ -1.48
NEK3P51956 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.78□□□□□ -1.48
NEK3P51956 RPS3AP15-201ENST00000483874 781 ntBASIC5.78□□□□□ -1.48
NEK3P51956 RN7SL570P-201ENST00000484405 292 ntBASIC5.78□□□□□ -1.48
NEK3P51956 RPS17P5-201ENST00000498293 408 ntBASIC5.78□□□□□ -1.48
NEK3P51956 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 GTF2IP9-201ENST00000502460 301 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.78□□□□□ -1.48
NEK3P51956 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.78□□□□□ -1.48
NEK3P51956 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.78□□□□□ -1.48
NEK3P51956 RNU6-276P-201ENST00000516114 96 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AC104417.1-201ENST00000523974 751 ntBASIC5.78□□□□□ -1.48
NEK3P51956 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.78□□□□□ -1.48
NEK3P51956 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.78□□□□□ -1.48
NEK3P51956 AL049872.1-201ENST00000556323 322 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.78□□□□□ -1.48
NEK3P51956 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.78□□□□□ -1.48
NEK3P51956 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms