Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CX3CR1P49238 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CX3CR1P49238 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CX3CR1P49238 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CX3CR1P49238 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CX3CR1P49238 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.33□□□□□ -1.72
CX3CR1P49238 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CR1P49238 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CX3CR1P49238 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CX3CR1P49238 AC110792.3-201ENST00000595906 1614 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 ZNF733P-202ENST00000444809 1573 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.33□□□□□ -1.72
CX3CR1P49238 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CR1P49238 SYT14P1-202ENST00000600441 1448 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 AC009643.2-201ENST00000603543 1448 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CR1P49238 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CR1P49238 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CR1P49238 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CX3CR1P49238 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CR1P49238 AL391361.1-201ENST00000405580 489 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CR1P49238 AC092162.1-201ENST00000432828 434 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CR1P49238 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.33□□□□□ -1.72
CX3CR1P49238 OR7E125P-201ENST00000443450 846 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 CASP3P1-201ENST00000446037 609 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 AURKAPS1-201ENST00000451805 1212 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.33□□□□□ -1.72
CX3CR1P49238 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.33□□□□□ -1.72
CX3CR1P49238 COPS8P2-201ENST00000473228 627 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.33□□□□□ -1.72
CX3CR1P49238 RN7SL809P-201ENST00000482040 297 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 HMGN2P25-201ENST00000486956 268 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.33□□□□□ -1.72
CX3CR1P49238 AC020890.1-201ENST00000491837 504 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 AC072052.1-201ENST00000496556 306 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 AC093890.1-201ENST00000502554 540 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 ARL4AP1-201ENST00000503220 705 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CR1P49238 COX6B1P5-201ENST00000509843 249 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 OR8X1P-201ENST00000534542 869 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 AC008147.3-201ENST00000548666 354 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 OR11J2P-201ENST00000555298 907 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CR1P49238 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CR1P49238 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CR1P49238 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CR1P49238 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CR1P49238 AC104687.2-201ENST00000604442 342 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 AC005377.1-201ENST00000605126 456 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CR1P49238 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CR1P49238 RMST_5.1-201ENST00000618704 126 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CR1P49238 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CR1P49238 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.33□□□□□ -1.72
CX3CR1P49238 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CR1P49238 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
CX3CR1P49238 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CR1P49238 PABPC1P6-201ENST00000445594 1829 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CR1P49238 BRAFP1-201ENST00000445336 2703 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CR1P49238 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CR1P49238 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CR1P49238 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CR1P49238 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CR1P49238 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CR1P49238 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
CX3CR1P49238 SNURFL-201ENST00000309296 343 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 BMS1P3-201ENST00000372011 932 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 MIR223-201ENST00000385204 110 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 MT-TP-201ENST00000387461 68 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CR1P49238 AL034403.1-201ENST00000399414 885 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CR1P49238 AL136116.2-201ENST00000404020 785 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 OR13Z1P-201ENST00000416141 834 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CR1P49238 GLUD1P9-201ENST00000420997 1173 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CR1P49238 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CR1P49238 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CR1P49238 RPS26P4-201ENST00000431743 355 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 AL450263.2-201ENST00000439400 589 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 NDUFA5P8-201ENST00000449019 346 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 FCF1P7-201ENST00000451185 558 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 OR7L1P-201ENST00000456181 380 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CR1P49238 RN7SL515P-201ENST00000463999 297 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 AC022795.1-201ENST00000473808 480 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CR1P49238 AC008410.1-201ENST00000483777 339 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 RN7SL30P-201ENST00000488416 306 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 HIGD1AP14-201ENST00000507617 282 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms