Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC074029.2-201ENST00000551045 634 ntBASIC5.48□□□□□ -1.53
MMP13P45452 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP13P45452 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP13P45452 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP13P45452 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 AC022884.2-201ENST00000578535 580 ntBASIC5.48□□□□□ -1.53
MMP13P45452 RBM22P1-201ENST00000578589 1214 ntBASIC5.48□□□□□ -1.53
MMP13P45452 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.48□□□□□ -1.53
MMP13P45452 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP13P45452 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 AC022022.2-201ENST00000602989 360 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AC009027.1-201ENST00000604510 479 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AC084036.1-201ENST00000609190 508 ntBASIC5.48□□□□□ -1.53
MMP13P45452 MIR8084-201ENST00000614105 89 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AC245389.2-201ENST00000616023 576 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AC242843.1-201ENST00000618702 573 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AP003499.2-201ENST00000624100 483 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AP003400.3-201ENST00000624904 346 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AC099654.6-201ENST00000636487 512 ntBASIC5.48□□□□□ -1.53
MMP13P45452 SAMMSON-209ENST00000641222 1100 ntBASIC5.48□□□□□ -1.53
MMP13P45452 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
MMP13P45452 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP13P45452 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
MMP13P45452 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP13P45452 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
MMP13P45452 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.47□□□□□ -1.53
MMP13P45452 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.47□□□□□ -1.53
MMP13P45452 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.47□□□□□ -1.53
MMP13P45452 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
MMP13P45452 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
MMP13P45452 RNU5E-10P-201ENST00000363506 118 ntBASIC5.47□□□□□ -1.53
MMP13P45452 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 AC009804.1-201ENST00000400949 179 ntBASIC5.47□□□□□ -1.53
MMP13P45452 RNA5SP487-201ENST00000410186 122 ntBASIC5.47□□□□□ -1.53
MMP13P45452 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.47□□□□□ -1.53
MMP13P45452 HIGD1AP15-201ENST00000416198 280 ntBASIC5.47□□□□□ -1.53
MMP13P45452 AC096644.3-201ENST00000416788 338 ntBASIC5.47□□□□□ -1.53
MMP13P45452 VN1R31P-201ENST00000417498 730 ntBASIC5.47□□□□□ -1.53
MMP13P45452 RCC2P2-201ENST00000422174 918 ntBASIC5.47□□□□□ -1.53
MMP13P45452 TXNL1P1-201ENST00000429528 554 ntBASIC5.47□□□□□ -1.53
MMP13P45452 AC124944.2-201ENST00000429866 1242 ntBASIC5.47□□□□□ -1.53
MMP13P45452 AC046176.1-201ENST00000435260 1170 ntBASIC5.47□□□□□ -1.53
MMP13P45452 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.47□□□□□ -1.53
MMP13P45452 AC007000.2-201ENST00000442564 487 ntBASIC5.47□□□□□ -1.53
MMP13P45452 CYCSP24-201ENST00000445119 316 ntBASIC5.47□□□□□ -1.53
MMP13P45452 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.47□□□□□ -1.53
MMP13P45452 RPS4XP12-201ENST00000461747 709 ntBASIC5.47□□□□□ -1.53
MMP13P45452 SIAH1P1-201ENST00000479411 923 ntBASIC5.47□□□□□ -1.53
MMP13P45452 AC108693.1-201ENST00000496068 432 ntBASIC5.47□□□□□ -1.53
MMP13P45452 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.47□□□□□ -1.53
MMP13P45452 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.47□□□□□ -1.53
MMP13P45452 NIFKP7-201ENST00000503365 834 ntBASIC5.47□□□□□ -1.53
MMP13P45452 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.47□□□□□ -1.53
MMP13P45452 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
MMP13P45452 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.47□□□□□ -1.53
MMP13P45452 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.47□□□□□ -1.53
MMP13P45452 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
MMP13P45452 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.47□□□□□ -1.53
MMP13P45452 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.47□□□□□ -1.53
MMP13P45452 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.47□□□□□ -1.53
MMP13P45452 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.47□□□□□ -1.53
MMP13P45452 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
MMP13P45452 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.47□□□□□ -1.53
MMP13P45452 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.47□□□□□ -1.53
MMP13P45452 AC245036.5-201ENST00000596330 847 ntBASIC5.47□□□□□ -1.53
MMP13P45452 AC011492.1-201ENST00000600023 315 ntBASIC5.47□□□□□ -1.53
MMP13P45452 AL359513.1-201ENST00000614364 557 ntBASIC5.47□□□□□ -1.53
MMP13P45452 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.47□□□□□ -1.53
MMP13P45452 AC090116.1-201ENST00000615679 446 ntBASIC5.47□□□□□ -1.53
MMP13P45452 AC109583.2-201ENST00000617367 129 ntBASIC5.47□□□□□ -1.53
MMP13P45452 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.47□□□□□ -1.53
MMP13P45452 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.47□□□□□ -1.53
MMP13P45452 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.47□□□□□ -1.53
MMP13P45452 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
MMP13P45452 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.47□□□□□ -1.53
MMP13P45452 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MMP13P45452 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.46□□□□□ -1.53
MMP13P45452 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
MMP13P45452 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
MMP13P45452 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
MMP13P45452 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms