Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.33□□□□□ -1.56
SSR1P43307 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.33□□□□□ -1.56
SSR1P43307 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSR1P43307 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.33□□□□□ -1.56
SSR1P43307 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSR1P43307 HNRNPCP4-201ENST00000571636 900 ntBASIC5.33□□□□□ -1.56
SSR1P43307 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.33□□□□□ -1.56
SSR1P43307 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.33□□□□□ -1.56
SSR1P43307 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSR1P43307 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSR1P43307 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSR1P43307 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSR1P43307 NXF4-202ENST00000416098 1465 ntBASIC5.32□□□□□ -1.56
SSR1P43307 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSR1P43307 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.32□□□□□ -1.56
SSR1P43307 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSR1P43307 DUTP5-201ENST00000406790 469 ntBASIC5.32□□□□□ -1.56
SSR1P43307 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.32□□□□□ -1.56
SSR1P43307 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.32□□□□□ -1.56
SSR1P43307 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.32□□□□□ -1.56
SSR1P43307 DPY19L1P2-201ENST00000426647 915 ntBASIC5.32□□□□□ -1.56
SSR1P43307 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.32□□□□□ -1.56
SSR1P43307 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.32□□□□□ -1.56
SSR1P43307 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.32□□□□□ -1.56
SSR1P43307 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSR1P43307 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.32□□□□□ -1.56
SSR1P43307 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SSR1P43307 RPL7L1P4-201ENST00000513004 707 ntBASIC5.32□□□□□ -1.56
SSR1P43307 AC018797.3-201ENST00000513388 1241 ntBASIC5.32□□□□□ -1.56
SSR1P43307 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.32□□□□□ -1.56
SSR1P43307 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSR1P43307 AC011840.5-201ENST00000582125 771 ntBASIC5.32□□□□□ -1.56
SSR1P43307 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.32□□□□□ -1.56
SSR1P43307 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.32□□□□□ -1.56
SSR1P43307 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.32□□□□□ -1.56
SSR1P43307 AC026368.1-201ENST00000614934 690 ntBASIC5.32□□□□□ -1.56
SSR1P43307 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
SSR1P43307 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSR1P43307 AC015813.6-201ENST00000624409 5808 ntBASIC5.32□□□□□ -1.56
SSR1P43307 PNPT1P2-201ENST00000456768 2050 ntBASIC5.32□□□□□ -1.56
SSR1P43307 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SSR1P43307 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.31□□□□□ -1.56
SSR1P43307 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.31□□□□□ -1.56
SSR1P43307 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSR1P43307 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSR1P43307 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSR1P43307 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSR1P43307 RN7SKP162-201ENST00000363605 345 ntBASIC5.31□□□□□ -1.56
SSR1P43307 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSR1P43307 SNORA70.10-201ENST00000384515 134 ntBASIC5.31□□□□□ -1.56
SSR1P43307 AC007738.1-201ENST00000413892 348 ntBASIC5.31□□□□□ -1.56
SSR1P43307 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.31□□□□□ -1.56
SSR1P43307 SLC35E1P1-201ENST00000419313 864 ntBASIC5.31□□□□□ -1.56
SSR1P43307 TXNP5-201ENST00000441043 315 ntBASIC5.31□□□□□ -1.56
SSR1P43307 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.31□□□□□ -1.56
SSR1P43307 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.31□□□□□ -1.56
SSR1P43307 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.31□□□□□ -1.56
SSR1P43307 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.31□□□□□ -1.56
SSR1P43307 AC093270.2-201ENST00000486157 792 ntBASIC5.31□□□□□ -1.56
SSR1P43307 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSR1P43307 AC010350.1-201ENST00000504908 231 ntBASIC5.31□□□□□ -1.56
SSR1P43307 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.31□□□□□ -1.56
SSR1P43307 IGKV3D-34-201ENST00000522638 302 ntBASIC5.31□□□□□ -1.56
SSR1P43307 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.31□□□□□ -1.56
SSR1P43307 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.31□□□□□ -1.56
SSR1P43307 AC135001.1-201ENST00000544546 283 ntBASIC5.31□□□□□ -1.56
SSR1P43307 AC004825.1-201ENST00000555068 586 ntBASIC5.31□□□□□ -1.56
SSR1P43307 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.31□□□□□ -1.56
SSR1P43307 AC234775.3-201ENST00000564612 656 ntBASIC5.31□□□□□ -1.56
SSR1P43307 AC012146.2-201ENST00000576545 416 ntBASIC5.31□□□□□ -1.56
SSR1P43307 AC011445.2-201ENST00000599274 173 ntBASIC5.31□□□□□ -1.56
SSR1P43307 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.31□□□□□ -1.56
SSR1P43307 AC008115.4-201ENST00000619780 775 ntBASIC5.31□□□□□ -1.56
SSR1P43307 BX005214.3-202ENST00000619809 325 ntBASIC5.31□□□□□ -1.56
SSR1P43307 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSR1P43307 BX005019.1-201ENST00000561881 1810 ntBASIC5.31□□□□□ -1.56
SSR1P43307 AC090017.1-201ENST00000548612 1779 ntBASIC5.31□□□□□ -1.56
SSR1P43307 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.31□□□□□ -1.56
SSR1P43307 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSR1P43307 AC134882.1-201ENST00000603738 1676 ntBASIC5.31□□□□□ -1.56
SSR1P43307 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SSR1P43307 AP000756.2-201ENST00000624168 2567 ntBASIC5.3□□□□□ -1.56
SSR1P43307 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSR1P43307 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.3□□□□□ -1.56
SSR1P43307 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.3□□□□□ -1.56
SSR1P43307 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSR1P43307 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.3□□□□□ -1.56
SSR1P43307 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
SSR1P43307 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SSR1P43307 RN7SKP114-201ENST00000410327 279 ntBASIC5.3□□□□□ -1.56
SSR1P43307 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SSR1P43307 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.3□□□□□ -1.56
SSR1P43307 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.3□□□□□ -1.56
SSR1P43307 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.3□□□□□ -1.56
SSR1P43307 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.3□□□□□ -1.56
SSR1P43307 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.3□□□□□ -1.56
SSR1P43307 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.3□□□□□ -1.56
SSR1P43307 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.3□□□□□ -1.56
SSR1P43307 AL035551.1-201ENST00000446931 348 ntBASIC5.3□□□□□ -1.56
SSR1P43307 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms