Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 Z95331.1-201ENST00000623075 23112 ntBASIC5.08□□□□□ -1.6
TNFSF9P41273 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF9P41273 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
TNFSF9P41273 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF9P41273 SNORA70F-201ENST00000384142 135 ntBASIC5.08□□□□□ -1.6
TNFSF9P41273 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.08□□□□□ -1.6
TNFSF9P41273 NPM1P48-201ENST00000436002 853 ntBASIC5.08□□□□□ -1.6
TNFSF9P41273 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFSF9P41273 NDUFA12P1-201ENST00000455914 406 ntBASIC5.08□□□□□ -1.6
TNFSF9P41273 RN7SKP5-201ENST00000517045 272 ntBASIC5.08□□□□□ -1.6
TNFSF9P41273 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TNFSF9P41273 AC016839.1-201ENST00000578162 867 ntBASIC5.08□□□□□ -1.6
TNFSF9P41273 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.08□□□□□ -1.6
TNFSF9P41273 AC008745.1-201ENST00000604064 271 ntBASIC5.08□□□□□ -1.6
TNFSF9P41273 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF9P41273 MIR378J-201ENST00000611988 109 ntBASIC5.08□□□□□ -1.6
TNFSF9P41273 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.08□□□□□ -1.6
TNFSF9P41273 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.08□□□□□ -1.6
TNFSF9P41273 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TNFSF9P41273 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF9P41273 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
TNFSF9P41273 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF9P41273 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF9P41273 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TNFSF9P41273 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.08□□□□□ -1.6
TNFSF9P41273 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF9P41273 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TNFSF9P41273 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TNFSF9P41273 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.07□□□□□ -1.6
TNFSF9P41273 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFSF9P41273 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TNFSF9P41273 RNA5SP332-201ENST00000391063 115 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFSF9P41273 RN7SKP267-201ENST00000410381 285 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AC092570.3-201ENST00000420113 693 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.07□□□□□ -1.6
TNFSF9P41273 HMGN2P27-201ENST00000427352 270 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.07□□□□□ -1.6
TNFSF9P41273 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AL138878.2-201ENST00000440581 1241 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 GTF3AP5-201ENST00000442645 697 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 H2AFZP5-201ENST00000446960 382 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AC090142.1-201ENST00000465776 462 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.07□□□□□ -1.6
TNFSF9P41273 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AC234771.5-201ENST00000600161 514 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 AC105105.5-201ENST00000622635 1294 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 AC021106.3-201ENST00000623925 531 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 AL022393.1-201ENST00000625142 1677 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TNFSF9P41273 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TNFSF9P41273 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.07□□□□□ -1.6
TNFSF9P41273 AL031119.1-201ENST00000404707 1879 ntBASIC5.07□□□□□ -1.6
TNFSF9P41273 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
TNFSF9P41273 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TNFSF9P41273 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFSF9P41273 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TNFSF9P41273 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 ZFRP1-201ENST00000457579 2970 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 GLULP6-201ENST00000399502 913 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TNFSF9P41273 AC119751.6-201ENST00000416712 186 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFSF9P41273 BX119904.3-201ENST00000428194 957 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFSF9P41273 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFSF9P41273 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 TDGF1P1-201ENST00000445734 527 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFSF9P41273 AC096741.1-201ENST00000472250 846 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFSF9P41273 RPL5P22-201ENST00000480199 884 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 MTND4LP2-201ENST00000502312 285 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 HMGB3P16-201ENST00000508037 287 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFSF9P41273 RNA5SP303-201ENST00000516192 130 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 RAB9BP1-201ENST00000519581 626 ntBASIC5.06□□□□□ -1.6
TNFSF9P41273 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF9P41273 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFSF9P41273 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms