Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA1P35221 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.36□□□□□ -1.55
CTNNA1P35221 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.36□□□□□ -1.55
CTNNA1P35221 AC069307.1-201ENST00000602820 447 ntBASIC5.36□□□□□ -1.55
CTNNA1P35221 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.36□□□□□ -1.55
CTNNA1P35221 BX322635.1-201ENST00000605804 496 ntBASIC5.36□□□□□ -1.55
CTNNA1P35221 RPSAP73-201ENST00000614820 330 ntBASIC5.36□□□□□ -1.55
CTNNA1P35221 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.36□□□□□ -1.55
CTNNA1P35221 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA1P35221 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA1P35221 AL034370.1-201ENST00000397254 1590 ntBASIC5.36□□□□□ -1.55
CTNNA1P35221 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.36□□□□□ -1.55
CTNNA1P35221 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.36□□□□□ -1.55
CTNNA1P35221 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA1P35221 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.36□□□□□ -1.55
CTNNA1P35221 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CTNNA1P35221 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.36□□□□□ -1.55
CTNNA1P35221 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.35□□□□□ -1.55
CTNNA1P35221 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTNNA1P35221 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTNNA1P35221 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CTNNA1P35221 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.35□□□□□ -1.55
CTNNA1P35221 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTNNA1P35221 SNORA2.3-201ENST00000383920 135 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CTNNA1P35221 AL031985.1-201ENST00000392713 418 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 AC005522.1-201ENST00000395416 346 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 RPS27AP11-201ENST00000402798 447 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTNNA1P35221 RN7SKP293-201ENST00000411389 296 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 RANP4-201ENST00000413361 655 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.35□□□□□ -1.55
CTNNA1P35221 AC019050.1-201ENST00000418508 492 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 AC073464.3-201ENST00000422564 712 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 RPL12P34-201ENST00000424532 479 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.35□□□□□ -1.55
CTNNA1P35221 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.35□□□□□ -1.55
CTNNA1P35221 TMX2P1-201ENST00000436507 708 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.35□□□□□ -1.55
CTNNA1P35221 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.35□□□□□ -1.55
CTNNA1P35221 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.35□□□□□ -1.55
CTNNA1P35221 HMGB1P26-201ENST00000452520 628 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.35□□□□□ -1.55
CTNNA1P35221 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.35□□□□□ -1.55
CTNNA1P35221 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.35□□□□□ -1.55
CTNNA1P35221 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.35□□□□□ -1.55
CTNNA1P35221 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTNNA1P35221 RPS4XP20-201ENST00000505751 772 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 RNU6-1004P-201ENST00000516584 111 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.35□□□□□ -1.55
CTNNA1P35221 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.35□□□□□ -1.55
CTNNA1P35221 RPL23AP53-201ENST00000521854 457 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 SMARCE1P4-201ENST00000523647 241 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.35□□□□□ -1.55
CTNNA1P35221 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.35□□□□□ -1.55
CTNNA1P35221 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.35□□□□□ -1.55
CTNNA1P35221 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.35□□□□□ -1.55
CTNNA1P35221 NDUFB4P11-201ENST00000560510 395 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.35□□□□□ -1.55
CTNNA1P35221 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.35□□□□□ -1.55
CTNNA1P35221 AC090953.1-201ENST00000604305 1092 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.35□□□□□ -1.55
CTNNA1P35221 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTNNA1P35221 AC090527.3-201ENST00000619041 548 ntBASIC5.35□□□□□ -1.55
CTNNA1P35221 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.35□□□□□ -1.55
CTNNA1P35221 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CTNNA1P35221 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CTNNA1P35221 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CTNNA1P35221 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.35□□□□□ -1.55
CTNNA1P35221 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.35□□□□□ -1.55
CTNNA1P35221 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTNNA1P35221 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTNNA1P35221 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTNNA1P35221 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTNNA1P35221 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.34□□□□□ -1.55
CTNNA1P35221 AC096656.1-201ENST00000623826 1364 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CTNNA1P35221 RNU6-146P-201ENST00000384602 108 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 RN7SKP97-201ENST00000410966 333 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.34□□□□□ -1.55
CTNNA1P35221 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.34□□□□□ -1.55
CTNNA1P35221 RPS29P14-201ENST00000431518 171 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.34□□□□□ -1.55
CTNNA1P35221 AC004980.3-201ENST00000447046 365 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 AL031584.1-201ENST00000447169 754 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 AL356981.1-201ENST00000454879 684 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 RPL23AP12-201ENST00000467573 473 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 SIAH1P1-201ENST00000479411 923 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.34□□□□□ -1.55
CTNNA1P35221 UBA52P3-201ENST00000491303 382 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 HMGB3P14-201ENST00000494195 599 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 GTF2F2P1-201ENST00000511083 675 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.34□□□□□ -1.55
CTNNA1P35221 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.34□□□□□ -1.55
CTNNA1P35221 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.34□□□□□ -1.55
CTNNA1P35221 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.34□□□□□ -1.55
CTNNA1P35221 AC116553.2-201ENST00000564203 463 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 NDUFA5P11-201ENST00000567995 343 ntBASIC5.34□□□□□ -1.55
CTNNA1P35221 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms