Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC209154.1-201ENST00000582156 337 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 AC007423.1-201ENST00000605009 627 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 AC107308.1-201ENST00000615897 301 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 AC131238.1-201ENST00000617135 328 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 AL353662.3-201ENST00000625131 237 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC13P31276 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HOXC13P31276 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.45□□□□□ -1.54
HOXC13P31276 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 AC012618.3-205ENST00000637896 1496 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC13P31276 ABCC13-202ENST00000463099 3842 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 AC006210.2-201ENST00000367074 1545 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC13P31276 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC13P31276 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC13P31276 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC13P31276 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC13P31276 U3.3-201ENST00000362986 216 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 RNU6-666P-201ENST00000363499 107 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 RNVU1-6-201ENST00000364688 164 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC13P31276 NUDT19P3-201ENST00000404698 555 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.44□□□□□ -1.54
HOXC13P31276 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC13P31276 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC13P31276 AL445528.1-201ENST00000426330 420 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 AL136231.1-201ENST00000429407 730 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 RPL5P2-201ENST00000429598 854 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 RPL19P16-201ENST00000433839 588 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC13P31276 RPL31P44-201ENST00000447680 377 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC13P31276 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC13P31276 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC13P31276 RPL7P41-201ENST00000485823 957 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 AC022133.1-201ENST00000490961 571 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 RN7SL346P-201ENST00000491561 294 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 RPS27AP16-201ENST00000492222 470 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 RPL37AP8-201ENST00000494116 276 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 AC006427.1-201ENST00000514359 712 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC13P31276 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC13P31276 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC13P31276 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC13P31276 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC13P31276 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC13P31276 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC13P31276 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC13P31276 AC018552.3-201ENST00000567416 561 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 AP005262.1-201ENST00000582646 997 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 PSMA6P4-201ENST00000603247 718 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 AC009597.2-201ENST00000604659 592 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 AP005131.7-201ENST00000610087 611 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC13P31276 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC13P31276 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HOXC13P31276 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC13P31276 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC13P31276 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC13P31276 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HOXC13P31276 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC13P31276 AL118496.1-201ENST00000440201 1812 ntBASIC5.44□□□□□ -1.54
HOXC13P31276 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC13P31276 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HOXC13P31276 AC021242.1-201ENST00000507315 2035 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC13P31276 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC13P31276 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HOXC13P31276 AC092747.4-201ENST00000620519 1861 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 AC114546.3-201ENST00000623582 1734 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC13P31276 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC13P31276 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
HOXC13P31276 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC13P31276 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HOXC13P31276 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HOXC13P31276 MIR589-201ENST00000385238 99 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 MIR320B1-201ENST00000390209 79 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 ADAM24P-201ENST00000398655 2101 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 AL136116.2-201ENST00000404020 785 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 OR13Z1P-201ENST00000416141 834 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 AC019050.1-201ENST00000418508 492 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 AC048351.1-201ENST00000420064 602 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 AL358176.3-201ENST00000420757 454 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 EIF2S2P3-201ENST00000428356 999 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC13P31276 AC091390.1-201ENST00000433904 331 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC13P31276 AC114878.1-201ENST00000441166 358 ntBASIC5.43□□□□□ -1.54
HOXC13P31276 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC13P31276 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms