Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 OR51B8P-201ENST00000449892 769 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.12□□□□□ -1.59
ABCD3P28288 HMGB1P38-201ENST00000490557 577 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 RN7SL466P-201ENST00000497546 295 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC010306.1-201ENST00000523223 1117 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 OR5AM1P-201ENST00000532136 1032 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC015720.2-201ENST00000567709 334 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC090312.2-201ENST00000582687 378 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC011445.2-201ENST00000599274 173 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.12□□□□□ -1.59
ABCD3P28288 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 AC016717.3-201ENST00000624730 554 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
ABCD3P28288 MIR4302-201ENST00000638058 60 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 AC022031.1-201ENST00000585985 2593 ntBASIC5.12□□□□□ -1.59
ABCD3P28288 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.12□□□□□ -1.59
ABCD3P28288 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.12□□□□□ -1.59
ABCD3P28288 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ABCD3P28288 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.11□□□□□ -1.59
ABCD3P28288 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.11□□□□□ -1.59
ABCD3P28288 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
ABCD3P28288 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.11□□□□□ -1.59
ABCD3P28288 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ABCD3P28288 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 RNU5B-1-201ENST00000363286 116 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 RNU6-178P-201ENST00000384631 104 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.11□□□□□ -1.59
ABCD3P28288 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 NPM1P24-201ENST00000428039 894 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 RPL12P18-201ENST00000437175 325 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.11□□□□□ -1.59
ABCD3P28288 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.11□□□□□ -1.59
ABCD3P28288 RPL5P25-201ENST00000441148 775 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.11□□□□□ -1.59
ABCD3P28288 AC092106.1-201ENST00000444291 373 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.11□□□□□ -1.59
ABCD3P28288 RN7SL583P-201ENST00000475692 287 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.11□□□□□ -1.59
ABCD3P28288 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 HPRT1P2-201ENST00000505250 544 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 GLUD1P3-202ENST00000508551 200 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.11□□□□□ -1.59
ABCD3P28288 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.11□□□□□ -1.59
ABCD3P28288 RNA5SP228-201ENST00000516232 133 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.11□□□□□ -1.59
ABCD3P28288 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 AC020937.1-201ENST00000519677 1013 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.11□□□□□ -1.59
ABCD3P28288 OR8Q1P-201ENST00000526467 655 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 OR8A2P-201ENST00000528631 952 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.11□□□□□ -1.59
ABCD3P28288 AC090751.1-201ENST00000566966 267 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AC009852.2-201ENST00000567898 485 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.11□□□□□ -1.59
ABCD3P28288 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.11□□□□□ -1.59
ABCD3P28288 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
ABCD3P28288 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.11□□□□□ -1.59
ABCD3P28288 AC006363.1-201ENST00000603806 463 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AL589674.2-201ENST00000604304 337 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AC096553.1-201ENST00000605169 829 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AL355816.1-201ENST00000607951 118 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.11□□□□□ -1.59
ABCD3P28288 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.11□□□□□ -1.59
ABCD3P28288 AC015712.7-201ENST00000615211 635 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AL118522.2-201ENST00000616045 615 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AC022960.3-201ENST00000619794 441 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AC132068.1-201ENST00000623805 459 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.11□□□□□ -1.59
ABCD3P28288 CDRT1-208ENST00000630868 794 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 AC099654.9-201ENST00000637055 678 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.11□□□□□ -1.59
ABCD3P28288 MRRFP1-201ENST00000435941 1675 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 HSPA8P14-201ENST00000552265 1805 ntBASIC5.11□□□□□ -1.59
ABCD3P28288 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ABCD3P28288 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms