Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 RHOT1P3-201ENST00000436571 331 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 HMGB3P9-201ENST00000441799 583 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC239798.3-201ENST00000454459 408 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 CYCSP34-201ENST00000458172 304 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC112206.1-201ENST00000468416 477 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC090114.3-201ENST00000479267 829 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 HMGN2P25-201ENST00000486956 268 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 TCP11X3P-202ENST00000514289 1254 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 RN7SKP147-201ENST00000517154 244 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 RN7SL52P-201ENST00000584271 284 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AP002884.5-201ENST00000595053 1132 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC087283.1-201ENST00000604029 1074 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC005377.1-201ENST00000605126 456 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AL353600.1-201ENST00000608148 251 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC004948.1-201ENST00000609858 672 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC097505.1-201ENST00000610199 565 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC019206.1-201ENST00000621938 425 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMBP28068 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 CR382285.2-201ENST00000624662 1495 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMBP28068 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMBP28068 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMBP28068 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HLA-DMBP28068 THAP12P8-201ENST00000447914 2115 ntBASIC3.71□□□□□ -1.81
HLA-DMBP28068 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DMBP28068 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC008549.2-201ENST00000333482 706 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DMBP28068 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 CHMP1B2P-201ENST00000399581 597 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 EIF4HP2-201ENST00000424380 563 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 CKS1BP6-201ENST00000424932 240 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC092162.1-201ENST00000432828 434 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 AL772161.1-201ENST00000439130 476 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC073587.1-201ENST00000447093 876 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 OTX2P1-201ENST00000450956 354 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 RPL7P61-201ENST00000451721 751 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 SBDSP1-204ENST00000453858 737 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 snoU13.20-201ENST00000459180 104 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 NDUFB5P1-201ENST00000508134 564 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC004980.4-201ENST00000513375 203 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 RNA5SP43-201ENST00000516559 110 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 RN7SKP260-201ENST00000516907 149 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 AP000676.2-201ENST00000529711 301 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 DYNLL1P4-201ENST00000549314 266 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC105036.1-201ENST00000566222 271 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC011447.4-201ENST00000587562 111 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 BNIP3P32-201ENST00000600015 554 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC133552.5-201ENST00000604266 540 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 SNORD91B-202ENST00000608459 222 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AL627230.1-201ENST00000613077 211 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AL591926.8-201ENST00000616876 211 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AL022401.1-201ENST00000619498 108 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 AC015804.1-201ENST00000622935 435 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DMBP28068 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DMBP28068 AL606537.1-201ENST00000607258 2011 ntBASIC3.71□□□□□ -1.82
HLA-DMBP28068 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DMBP28068 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms