Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFSF4P23510 AC023158.2-201ENST00000614876 543 ntBASIC5.21□□□□□ -1.58
TNFSF4P23510 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.21□□□□□ -1.58
TNFSF4P23510 AC245014.3-201ENST00000618589 347 ntBASIC5.21□□□□□ -1.58
TNFSF4P23510 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TNFSF4P23510 AL512652.1-201ENST00000619006 500 ntBASIC5.21□□□□□ -1.58
TNFSF4P23510 AP002791.1-201ENST00000623291 381 ntBASIC5.21□□□□□ -1.58
TNFSF4P23510 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.21□□□□□ -1.58
TNFSF4P23510 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.21□□□□□ -1.58
TNFSF4P23510 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.21□□□□□ -1.58
TNFSF4P23510 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFSF4P23510 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.21□□□□□ -1.58
TNFSF4P23510 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.21□□□□□ -1.58
TNFSF4P23510 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
TNFSF4P23510 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TNFSF4P23510 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFSF4P23510 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TNFSF4P23510 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF4P23510 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFSF4P23510 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 AL031119.1-201ENST00000404707 1879 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC140134.1-201ENST00000511830 3544 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFSF4P23510 PANDAR-201ENST00000629595 1506 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 COX6B1P3-201ENST00000312310 260 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF4P23510 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TNFSF4P23510 SNORA68.2-201ENST00000391263 128 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AL161909.1-201ENST00000397390 712 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 RN7SKP151-201ENST00000410230 316 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 RPS6P23-201ENST00000413224 722 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 GTF2IP5-201ENST00000414608 731 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 MTND2P16-201ENST00000419987 799 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF4P23510 MTCYBP31-201ENST00000438855 1122 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 NANOGP9-201ENST00000439890 892 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 MTND1P31-201ENST00000449206 961 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC073594.1-201ENST00000462065 364 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFSF4P23510 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC114728.1-201ENST00000488289 483 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 FTH1P24-201ENST00000503502 462 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 MTCYBP35-201ENST00000503630 1137 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC011352.3-201ENST00000505162 593 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 MTCYBP16-201ENST00000509187 1129 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC087808.1-201ENST00000520501 361 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.2□□□□□ -1.58
TNFSF4P23510 DUXAP5-201ENST00000529668 529 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 TOMM20P1-201ENST00000534518 427 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.2□□□□□ -1.58
TNFSF4P23510 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC008687.2-201ENST00000597865 520 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AP001437.1-201ENST00000608783 456 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC097478.2-201ENST00000610572 514 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC092266.1-201ENST00000610958 165 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC107075.1-201ENST00000613695 314 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC231759.1-201ENST00000616455 597 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AL512506.2-201ENST00000624472 458 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.2□□□□□ -1.58
TNFSF4P23510 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFSF4P23510 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC090971.4-201ENST00000560291 1800 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF4P23510 AC235565.1-201ENST00000456962 1325 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 AC114546.3-201ENST00000623582 1734 ntBASIC5.2□□□□□ -1.58
TNFSF4P23510 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TNFSF4P23510 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.19□□□□□ -1.58
TNFSF4P23510 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TNFSF4P23510 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.19□□□□□ -1.58
TNFSF4P23510 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TNFSF4P23510 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TNFSF4P23510 AC011504.1-201ENST00000623331 4103 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms