Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.9□□□□□ -1.63
XRCC1P18887 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.9□□□□□ -1.63
XRCC1P18887 AL138787.1-202ENST00000437804 898 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 AL772161.1-201ENST00000439130 476 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.9□□□□□ -1.63
XRCC1P18887 AL137845.2-201ENST00000444292 988 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 AC002553.2-201ENST00000453217 340 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 RPS3AP41-201ENST00000462701 778 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 AC112206.1-201ENST00000468416 477 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 SEPT7P6-201ENST00000469999 1143 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.9□□□□□ -1.63
XRCC1P18887 RN7SL319P-201ENST00000480656 221 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.9□□□□□ -1.63
XRCC1P18887 AC093890.1-201ENST00000502554 540 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.9□□□□□ -1.63
XRCC1P18887 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
XRCC1P18887 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.9□□□□□ -1.63
XRCC1P18887 TRAV11-201ENST00000539512 339 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.9□□□□□ -1.63
XRCC1P18887 AC116651.1-201ENST00000609724 556 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 AP001784.1-201ENST00000624107 428 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
XRCC1P18887 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
XRCC1P18887 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
XRCC1P18887 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
XRCC1P18887 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.9□□□□□ -1.63
XRCC1P18887 MTND5P23-201ENST00000430812 1655 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
XRCC1P18887 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.89□□□□□ -1.63
XRCC1P18887 AC021242.1-201ENST00000507315 2035 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
XRCC1P18887 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
XRCC1P18887 RN7SKP149-201ENST00000363008 344 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 RNU6-697P-201ENST00000363348 107 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 ATP5HP3-201ENST00000396994 486 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 AL021331.1-201ENST00000402817 582 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 SNORA77-201ENST00000408716 125 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.89□□□□□ -1.63
XRCC1P18887 COX6B1P1-201ENST00000415962 213 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 UBE2V2P3-201ENST00000433562 437 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 AC006466.1-201ENST00000438721 289 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.89□□□□□ -1.63
XRCC1P18887 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.89□□□□□ -1.63
XRCC1P18887 TCEA1P1-201ENST00000449716 880 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 RPL35AP28-201ENST00000459730 331 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.89□□□□□ -1.63
XRCC1P18887 AC091180.1-201ENST00000462104 372 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 NPM1P29-201ENST00000483112 803 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 RPS23P1-201ENST00000491662 432 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.89□□□□□ -1.63
XRCC1P18887 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.89□□□□□ -1.63
XRCC1P18887 ENPP7P9-201ENST00000514456 627 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.89□□□□□ -1.63
XRCC1P18887 AL121839.1-201ENST00000556233 1185 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
XRCC1P18887 NDUFB4P11-201ENST00000560510 395 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.89□□□□□ -1.63
XRCC1P18887 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.89□□□□□ -1.63
XRCC1P18887 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.89□□□□□ -1.63
XRCC1P18887 Mico1.1-201ENST00000611698 204 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 OR8G7P-201ENST00000616658 848 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
XRCC1P18887 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
XRCC1P18887 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
XRCC1P18887 AL022322.2-201ENST00000624072 20397 ntBASIC4.89□□□□□ -1.63
XRCC1P18887 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.89□□□□□ -1.63
XRCC1P18887 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.89□□□□□ -1.63
XRCC1P18887 MAPK10-349ENST00000641767 3661 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
XRCC1P18887 AC097461.1-201ENST00000568928 2821 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
XRCC1P18887 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 AC103591.2-201ENST00000265259 766 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 RNU4-44P-201ENST00000363050 141 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
XRCC1P18887 AL136116.2-201ENST00000404020 785 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.88□□□□□ -1.63
XRCC1P18887 EIF4A1P1-201ENST00000420241 934 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 OR2AM1P-201ENST00000422137 422 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.88□□□□□ -1.63
XRCC1P18887 HMGB1P32-201ENST00000425971 565 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 AC104837.2-201ENST00000427236 424 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 RPS29P9-201ENST00000440360 171 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.88□□□□□ -1.63
XRCC1P18887 AL589765.3-201ENST00000446084 462 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 RPS3AP53-201ENST00000454716 778 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 AC093166.2-201ENST00000455969 1017 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 AC092324.1-201ENST00000468671 324 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 AC090686.1-201ENST00000481577 749 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 RN7SL591P-201ENST00000496150 292 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms