Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL11A1P12107 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.25□□□□□ -1.57
COL11A1P12107 AC022417.1-201ENST00000624768 1303 ntBASIC5.25□□□□□ -1.57
COL11A1P12107 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
COL11A1P12107 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL11A1P12107 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL11A1P12107 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL11A1P12107 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL11A1P12107 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL11A1P12107 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL11A1P12107 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.25□□□□□ -1.57
COL11A1P12107 RPS27AP12-201ENST00000429552 465 ntBASIC5.25□□□□□ -1.57
COL11A1P12107 RPS29P17-201ENST00000430795 166 ntBASIC5.25□□□□□ -1.57
COL11A1P12107 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.25□□□□□ -1.57
COL11A1P12107 CYCSP34-201ENST00000458172 304 ntBASIC5.25□□□□□ -1.57
COL11A1P12107 MRPL49P2-201ENST00000521066 465 ntBASIC5.25□□□□□ -1.57
COL11A1P12107 AC023575.1-201ENST00000580510 358 ntBASIC5.25□□□□□ -1.57
COL11A1P12107 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL11A1P12107 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.25□□□□□ -1.57
COL11A1P12107 MIR6716-201ENST00000613413 80 ntBASIC5.25□□□□□ -1.57
COL11A1P12107 AL133243.1-201ENST00000614487 366 ntBASIC5.25□□□□□ -1.57
COL11A1P12107 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
COL11A1P12107 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
COL11A1P12107 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL11A1P12107 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL11A1P12107 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL11A1P12107 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL11A1P12107 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL11A1P12107 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL11A1P12107 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.24□□□□□ -1.57
COL11A1P12107 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.24□□□□□ -1.57
COL11A1P12107 UGT2B26P-201ENST00000508672 1613 ntBASIC5.24□□□□□ -1.57
COL11A1P12107 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.24□□□□□ -1.57
COL11A1P12107 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL11A1P12107 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL11A1P12107 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.24□□□□□ -1.57
COL11A1P12107 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.24□□□□□ -1.57
COL11A1P12107 NPM1P26-201ENST00000426339 738 ntBASIC5.24□□□□□ -1.57
COL11A1P12107 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.24□□□□□ -1.57
COL11A1P12107 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
COL11A1P12107 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
COL11A1P12107 FKBP1BP1-201ENST00000553366 325 ntBASIC5.24□□□□□ -1.57
COL11A1P12107 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.24□□□□□ -1.57
COL11A1P12107 AC073137.1-201ENST00000605636 634 ntBASIC5.24□□□□□ -1.57
COL11A1P12107 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL11A1P12107 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL11A1P12107 SAMMSON-210ENST00000641260 1308 ntBASIC5.24□□□□□ -1.57
COL11A1P12107 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
COL11A1P12107 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL11A1P12107 AC005261.4-201ENST00000600047 1385 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.23□□□□□ -1.57
COL11A1P12107 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.23□□□□□ -1.57
COL11A1P12107 AL356095.1-201ENST00000417217 199 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 AC114755.5-201ENST00000447760 831 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 RN7SL98P-201ENST00000462271 300 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.23□□□□□ -1.57
COL11A1P12107 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.23□□□□□ -1.57
COL11A1P12107 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
COL11A1P12107 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 RN7SL176P-201ENST00000580352 264 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.23□□□□□ -1.57
COL11A1P12107 AC015804.1-201ENST00000622935 435 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL11A1P12107 AL137141.1-201ENST00000624622 4836 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 AC007998.4-201ENST00000612496 2533 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COL11A1P12107 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
COL11A1P12107 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.23□□□□□ -1.57
COL11A1P12107 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
COL11A1P12107 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.23□□□□□ -1.57
COL11A1P12107 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL11A1P12107 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.23□□□□□ -1.57
COL11A1P12107 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.23□□□□□ -1.57
COL11A1P12107 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.23□□□□□ -1.57
COL11A1P12107 VTI1BP4-201ENST00000427516 527 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 RPL23AP43-201ENST00000446445 471 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.23□□□□□ -1.57
COL11A1P12107 AC020890.1-201ENST00000491837 504 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.23□□□□□ -1.57
COL11A1P12107 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.23□□□□□ -1.57
COL11A1P12107 LINC00622-201ENST00000562811 1570 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 AC021483.2-201ENST00000567415 758 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL11A1P12107 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.23□□□□□ -1.57
COL11A1P12107 AL109618.2-201ENST00000605527 211 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 AC108467.2-201ENST00000617640 1597 ntBASIC5.23□□□□□ -1.57
COL11A1P12107 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL11A1P12107 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL11A1P12107 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
COL11A1P12107 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms