Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 IGLVI-42-201ENST00000522485 381 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AF235103.2-201ENST00000525753 346 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PDGFAP04085 OR8L1P-201ENST00000534005 955 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 AC090502.2-201ENST00000549267 280 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AL359212.1-201ENST00000556608 614 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
PDGFAP04085 MIR4437-201ENST00000581331 60 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 TPMTP1-201ENST00000592307 737 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC036176.3-201ENST00000602456 418 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 CYCSP1-201ENST00000604815 315 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC241377.1-201ENST00000619797 406 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AC112204.3-201ENST00000623822 332 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 FER-210ENST00000628534 558 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFAP04085 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFAP04085 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PDGFAP04085 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFAP04085 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
PDGFAP04085 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFAP04085 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFAP04085 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PDGFAP04085 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 QRSL1P1-201ENST00000400977 1540 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 CYP2G2P-201ENST00000594920 1485 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PDGFAP04085 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 RN7SKP171-201ENST00000364417 303 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 RN7SKP55-201ENST00000364888 307 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 SNRPEP2-201ENST00000397592 279 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 AL033519.1-201ENST00000407266 307 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFAP04085 RN7SKP266-201ENST00000410232 287 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 RN7SKP205-201ENST00000410999 307 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 ZNF90P2-204ENST00000419323 1075 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AL593856.1-201ENST00000419949 805 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 COX6CP17-201ENST00000421389 185 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFAP04085 PTPN2P1-201ENST00000423212 1072 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 RPL3P11-201ENST00000434028 1146 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFAP04085 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.61□□□□□ -1.35
PDGFAP04085 AL390728.3-201ENST00000452704 270 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFAP04085 RN7SL168P-201ENST00000463821 279 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 UOX-201ENST00000471089 899 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AC087312.1-201ENST00000471411 480 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AL591122.1-201ENST00000487348 492 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 FAM172BP-201ENST00000487497 1089 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 RPL35P6-201ENST00000490024 372 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 NENFP3-201ENST00000503735 313 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 SUMO2P4-201ENST00000504193 276 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFAP04085 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 OR5F2P-201ENST00000532761 941 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.61□□□□□ -1.35
PDGFAP04085 CBX3P5-201ENST00000552017 521 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFAP04085 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFAP04085 MIR5186-201ENST00000577504 120 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFAP04085 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 RN7SL667P-201ENST00000582817 298 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.61□□□□□ -1.35
PDGFAP04085 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
PDGFAP04085 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms