Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.28□□□□□ -1.4
COL3A1P02461 AF230666.2-201ENST00000602328 725 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AC114878.2-201ENST00000604863 1251 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AL391834.1-201ENST00000609609 560 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AL354950.1-201ENST00000614150 568 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AC004232.3-201ENST00000622977 525 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.28□□□□□ -1.4
COL3A1P02461 Z98755.1-201ENST00000407015 1384 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
COL3A1P02461 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL3A1P02461 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.28□□□□□ -1.4
COL3A1P02461 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL3A1P02461 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.28□□□□□ -1.4
COL3A1P02461 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.28□□□□□ -1.4
COL3A1P02461 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.28□□□□□ -1.4
COL3A1P02461 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL3A1P02461 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL3A1P02461 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.28□□□□□ -1.4
COL3A1P02461 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.28□□□□□ -1.4
COL3A1P02461 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL3A1P02461 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL3A1P02461 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL3A1P02461 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL3A1P02461 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL3A1P02461 SNORD113.2-201ENST00000364166 89 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.28□□□□□ -1.4
COL3A1P02461 OR5M12P-201ENST00000423388 929 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.28□□□□□ -1.4
COL3A1P02461 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.28□□□□□ -1.4
COL3A1P02461 AL136455.1-201ENST00000441083 1240 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.28□□□□□ -1.4
COL3A1P02461 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.28□□□□□ -1.4
COL3A1P02461 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.28□□□□□ -1.4
COL3A1P02461 AC007016.1-201ENST00000512110 244 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.28□□□□□ -1.4
COL3A1P02461 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.28□□□□□ -1.4
COL3A1P02461 AC138701.1-201ENST00000524329 714 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.28□□□□□ -1.4
COL3A1P02461 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.28□□□□□ -1.4
COL3A1P02461 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
COL3A1P02461 AC079075.1-201ENST00000559543 878 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.28□□□□□ -1.4
COL3A1P02461 AC245884.10-201ENST00000597355 337 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AC115286.1-201ENST00000604298 434 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AL451086.1-201ENST00000605596 223 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AC013244.3-201ENST00000605614 388 ntBASIC6.28□□□□□ -1.4
COL3A1P02461 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
COL3A1P02461 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL3A1P02461 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL3A1P02461 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.27□□□□□ -1.41
COL3A1P02461 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 BCORP1-203ENST00000513194 5093 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.27□□□□□ -1.41
COL3A1P02461 KARSP3-201ENST00000571212 1504 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL3A1P02461 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.27□□□□□ -1.41
COL3A1P02461 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL3A1P02461 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL3A1P02461 MIR129-1-201ENST00000384972 72 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 RNU2-50P-201ENST00000410494 143 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AL591848.1-201ENST00000413092 322 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AC245028.1-201ENST00000423259 256 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.27□□□□□ -1.41
COL3A1P02461 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.27□□□□□ -1.41
COL3A1P02461 CEACAMP9-201ENST00000442990 513 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.27□□□□□ -1.41
COL3A1P02461 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AC010326.1-201ENST00000462726 602 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AC020890.1-201ENST00000491837 504 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AK4P6-201ENST00000505168 528 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AC111000.5-201ENST00000506559 1178 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.27□□□□□ -1.41
COL3A1P02461 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.27□□□□□ -1.41
COL3A1P02461 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.27□□□□□ -1.41
COL3A1P02461 EIF1AXP2-201ENST00000555940 413 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.27□□□□□ -1.41
COL3A1P02461 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 ZNF92P2-201ENST00000600543 1059 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AL157392.4-201ENST00000609756 345 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 OR8G7P-201ENST00000616658 848 ntBASIC6.27□□□□□ -1.41
COL3A1P02461 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.27□□□□□ -1.41
COL3A1P02461 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL3A1P02461 MAPK10-328ENST00000641553 4009 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL3A1P02461 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL3A1P02461 SEPT7P7-201ENST00000420492 1301 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 MTND4P9-201ENST00000507819 1346 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL3A1P02461 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL3A1P02461 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms