Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TNFP01375 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TNFP01375 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TNFP01375 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TNFP01375 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TNFP01375 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TNFP01375 AL136164.3-201ENST00000624429 3978 ntBASIC4.64□□□□□ -1.67
TNFP01375 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TNFP01375 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.64□□□□□ -1.67
TNFP01375 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TNFP01375 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.64□□□□□ -1.67
TNFP01375 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TNFP01375 AC120036.2-201ENST00000509729 1474 ntBASIC4.64□□□□□ -1.67
TNFP01375 KARSP3-201ENST00000571212 1504 ntBASIC4.64□□□□□ -1.67
TNFP01375 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TNFP01375 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TNFP01375 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.64□□□□□ -1.67
TNFP01375 CNOT7P1-201ENST00000429006 852 ntBASIC4.64□□□□□ -1.67
TNFP01375 AC097523.2-201ENST00000435551 652 ntBASIC4.64□□□□□ -1.67
TNFP01375 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.64□□□□□ -1.67
TNFP01375 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.64□□□□□ -1.67
TNFP01375 AC079168.2-201ENST00000453977 416 ntBASIC4.64□□□□□ -1.67
TNFP01375 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.64□□□□□ -1.67
TNFP01375 NDUFA5P9-201ENST00000472609 340 ntBASIC4.64□□□□□ -1.67
TNFP01375 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.64□□□□□ -1.67
TNFP01375 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.64□□□□□ -1.67
TNFP01375 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.64□□□□□ -1.67
TNFP01375 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.64□□□□□ -1.67
TNFP01375 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.64□□□□□ -1.67
TNFP01375 AC005868.1-201ENST00000536421 331 ntBASIC4.64□□□□□ -1.67
TNFP01375 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.64□□□□□ -1.67
TNFP01375 AL049830.4-201ENST00000555149 351 ntBASIC4.64□□□□□ -1.67
TNFP01375 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.64□□□□□ -1.67
TNFP01375 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.64□□□□□ -1.67
TNFP01375 AC209154.1-201ENST00000582156 337 ntBASIC4.64□□□□□ -1.67
TNFP01375 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.64□□□□□ -1.67
TNFP01375 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.64□□□□□ -1.67
TNFP01375 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.64□□□□□ -1.67
TNFP01375 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TNFP01375 AC107068.1-201ENST00000563286 4218 ntBASIC4.64□□□□□ -1.67
TNFP01375 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
TNFP01375 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TNFP01375 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
TNFP01375 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
TNFP01375 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TNFP01375 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
TNFP01375 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TNFP01375 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.63□□□□□ -1.67
TNFP01375 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TNFP01375 SNORA71.2-201ENST00000364941 134 ntBASIC4.63□□□□□ -1.67
TNFP01375 RNA5SP397-201ENST00000391323 118 ntBASIC4.63□□□□□ -1.67
TNFP01375 AC136624.1-201ENST00000400791 413 ntBASIC4.63□□□□□ -1.67
TNFP01375 Z98745.1-201ENST00000402553 494 ntBASIC4.63□□□□□ -1.67
TNFP01375 AC006065.1-201ENST00000422539 802 ntBASIC4.63□□□□□ -1.67
TNFP01375 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.63□□□□□ -1.67
TNFP01375 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.63□□□□□ -1.67
TNFP01375 OR52A4P-201ENST00000472867 958 ntBASIC4.63□□□□□ -1.67
TNFP01375 RN7SL860P-201ENST00000473738 223 ntBASIC4.63□□□□□ -1.67
TNFP01375 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.63□□□□□ -1.67
TNFP01375 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.63□□□□□ -1.67
TNFP01375 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.63□□□□□ -1.67
TNFP01375 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.63□□□□□ -1.67
TNFP01375 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.63□□□□□ -1.67
TNFP01375 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.63□□□□□ -1.67
TNFP01375 MIR4284-201ENST00000578924 81 ntBASIC4.63□□□□□ -1.67
TNFP01375 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.63□□□□□ -1.67
TNFP01375 AC069061.3-201ENST00000582254 823 ntBASIC4.63□□□□□ -1.67
TNFP01375 AC006363.1-201ENST00000603806 463 ntBASIC4.63□□□□□ -1.67
TNFP01375 AC073137.1-201ENST00000605636 634 ntBASIC4.63□□□□□ -1.67
TNFP01375 MIR378J-201ENST00000611988 109 ntBASIC4.63□□□□□ -1.67
TNFP01375 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.63□□□□□ -1.67
TNFP01375 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TNFP01375 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TNFP01375 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.63□□□□□ -1.67
TNFP01375 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.63□□□□□ -1.67
TNFP01375 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TNFP01375 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TNFP01375 AC097063.1-201ENST00000426714 1797 ntBASIC4.63□□□□□ -1.67
TNFP01375 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.63□□□□□ -1.67
TNFP01375 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFP01375 AC006484.1-201ENST00000435086 1884 ntBASIC4.62□□□□□ -1.67
TNFP01375 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFP01375 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TNFP01375 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFP01375 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TNFP01375 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFP01375 ZNF137P-201ENST00000456718 1920 ntBASIC4.62□□□□□ -1.67
TNFP01375 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFP01375 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
TNFP01375 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFP01375 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFP01375 AC108467.2-201ENST00000617640 1597 ntBASIC4.62□□□□□ -1.67
TNFP01375 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFP01375 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.62□□□□□ -1.67
TNFP01375 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.62□□□□□ -1.67
TNFP01375 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFP01375 AL132640.2-201ENST00000559968 1698 ntBASIC4.62□□□□□ -1.67
TNFP01375 AL590762.2-201ENST00000395798 571 ntBASIC4.62□□□□□ -1.67
TNFP01375 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TNFP01375 AL121878.1-201ENST00000418638 859 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms