Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 RN7SL193P-201ENST00000491708 276 ntBASIC5.54□□□□□ -1.52
PEX1O43933 AC083795.1-201ENST00000491760 320 ntBASIC5.54□□□□□ -1.52
PEX1O43933 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.54□□□□□ -1.52
PEX1O43933 MTND4P2-201ENST00000507767 1203 ntBASIC5.54□□□□□ -1.52
PEX1O43933 AC021146.7-201ENST00000509604 775 ntBASIC5.54□□□□□ -1.52
PEX1O43933 AC114781.3-201ENST00000512083 142 ntBASIC5.54□□□□□ -1.52
PEX1O43933 MRPS33P3-201ENST00000513456 322 ntBASIC5.54□□□□□ -1.52
PEX1O43933 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.54□□□□□ -1.52
PEX1O43933 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.54□□□□□ -1.52
PEX1O43933 IGLVIV-64-201ENST00000518581 301 ntBASIC5.54□□□□□ -1.52
PEX1O43933 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.54□□□□□ -1.52
PEX1O43933 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.54□□□□□ -1.52
PEX1O43933 WBP1LP3-201ENST00000523033 208 ntBASIC5.54□□□□□ -1.52
PEX1O43933 NDUFS5P6-201ENST00000529136 295 ntBASIC5.54□□□□□ -1.52
PEX1O43933 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.54□□□□□ -1.52
PEX1O43933 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.54□□□□□ -1.52
PEX1O43933 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.54□□□□□ -1.52
PEX1O43933 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.54□□□□□ -1.52
PEX1O43933 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 AC023813.2-201ENST00000564321 469 ntBASIC5.54□□□□□ -1.52
PEX1O43933 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.54□□□□□ -1.52
PEX1O43933 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.54□□□□□ -1.52
PEX1O43933 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 AC006272.2-201ENST00000594725 163 ntBASIC5.54□□□□□ -1.52
PEX1O43933 AC121247.2-201ENST00000604776 136 ntBASIC5.54□□□□□ -1.52
PEX1O43933 MIR6793-201ENST00000612376 63 ntBASIC5.54□□□□□ -1.52
PEX1O43933 uc_338.26-201ENST00000612659 160 ntBASIC5.54□□□□□ -1.52
PEX1O43933 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PEX1O43933 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 AC131159.1-201ENST00000621854 213 ntBASIC5.54□□□□□ -1.52
PEX1O43933 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 OR8G3P-202ENST00000641572 1255 ntBASIC5.54□□□□□ -1.52
PEX1O43933 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PEX1O43933 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PEX1O43933 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PEX1O43933 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PEX1O43933 AL356317.1-201ENST00000396110 1436 ntBASIC5.54□□□□□ -1.52
PEX1O43933 RBPJP7-201ENST00000442803 1447 ntBASIC5.54□□□□□ -1.52
PEX1O43933 RBPJP5-201ENST00000449433 1447 ntBASIC5.54□□□□□ -1.52
PEX1O43933 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PEX1O43933 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PEX1O43933 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PEX1O43933 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
PEX1O43933 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PEX1O43933 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.54□□□□□ -1.52
PEX1O43933 AC119674.1-202ENST00000641333 1860 ntBASIC5.54□□□□□ -1.52
PEX1O43933 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PEX1O43933 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
PEX1O43933 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PEX1O43933 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PEX1O43933 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PEX1O43933 TTC39DP-201ENST00000416781 1688 ntBASIC5.53□□□□□ -1.52
PEX1O43933 GNL2P1-201ENST00000451274 2190 ntBASIC5.53□□□□□ -1.52
PEX1O43933 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PEX1O43933 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PEX1O43933 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PEX1O43933 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.53□□□□□ -1.52
PEX1O43933 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.53□□□□□ -1.52
PEX1O43933 AC079298.1-201ENST00000625026 1619 ntBASIC5.53□□□□□ -1.52
PEX1O43933 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PEX1O43933 RNA5SP211-201ENST00000365516 117 ntBASIC5.53□□□□□ -1.52
PEX1O43933 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PEX1O43933 MIR323B-201ENST00000385269 82 ntBASIC5.53□□□□□ -1.52
PEX1O43933 AL136310.1-201ENST00000404926 654 ntBASIC5.53□□□□□ -1.52
PEX1O43933 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.53□□□□□ -1.52
PEX1O43933 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.53□□□□□ -1.52
PEX1O43933 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.53□□□□□ -1.52
PEX1O43933 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.53□□□□□ -1.52
PEX1O43933 MTND4P3-201ENST00000417829 541 ntBASIC5.53□□□□□ -1.52
PEX1O43933 USP9YP26-201ENST00000421008 661 ntBASIC5.53□□□□□ -1.52
PEX1O43933 KCTD10P1-201ENST00000434203 625 ntBASIC5.53□□□□□ -1.52
PEX1O43933 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.53□□□□□ -1.52
PEX1O43933 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.53□□□□□ -1.52
PEX1O43933 TUBB4BP6-201ENST00000437576 479 ntBASIC5.53□□□□□ -1.52
PEX1O43933 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.53□□□□□ -1.52
PEX1O43933 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PEX1O43933 AC073109.1-201ENST00000445066 978 ntBASIC5.53□□□□□ -1.52
PEX1O43933 AC069540.1-201ENST00000446320 988 ntBASIC5.53□□□□□ -1.52
PEX1O43933 CYCSP42-201ENST00000450823 238 ntBASIC5.53□□□□□ -1.52
PEX1O43933 AC016027.4-201ENST00000450866 277 ntBASIC5.53□□□□□ -1.52
PEX1O43933 RPS6P2-201ENST00000454208 705 ntBASIC5.53□□□□□ -1.52
PEX1O43933 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.53□□□□□ -1.52
PEX1O43933 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.53□□□□□ -1.52
PEX1O43933 PFN1P6-201ENST00000476786 399 ntBASIC5.53□□□□□ -1.52
PEX1O43933 RPL38P3-201ENST00000484463 213 ntBASIC5.53□□□□□ -1.52
PEX1O43933 AC069304.1-201ENST00000491593 704 ntBASIC5.53□□□□□ -1.52
PEX1O43933 AC034244.1-201ENST00000507687 207 ntBASIC5.53□□□□□ -1.52
PEX1O43933 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.53□□□□□ -1.52
PEX1O43933 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.53□□□□□ -1.52
PEX1O43933 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.53□□□□□ -1.52
PEX1O43933 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.53□□□□□ -1.52
PEX1O43933 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.53□□□□□ -1.52
PEX1O43933 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.53□□□□□ -1.52
PEX1O43933 AP000926.4-201ENST00000527351 454 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 469.8 ms