Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PHGDHO43175 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PHGDHO43175 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.59□□□□□ -1.51
PHGDHO43175 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
PHGDHO43175 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.59□□□□□ -1.51
PHGDHO43175 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 RNU1-150P-201ENST00000362491 162 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.59□□□□□ -1.51
PHGDHO43175 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 RN7SKP278-201ENST00000410504 342 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 Z75741.2-201ENST00000417272 1167 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 NPM1P18-201ENST00000434232 732 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.59□□□□□ -1.51
PHGDHO43175 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.59□□□□□ -1.51
PHGDHO43175 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.59□□□□□ -1.51
PHGDHO43175 AL935212.3-201ENST00000450729 284 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 RN7SL168P-201ENST00000463821 279 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 LSM3P4-201ENST00000502948 309 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 DUTP7-201ENST00000507982 486 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.59□□□□□ -1.51
PHGDHO43175 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.59□□□□□ -1.51
PHGDHO43175 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.59□□□□□ -1.51
PHGDHO43175 OR5AM1P-201ENST00000532136 1032 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC122688.1-201ENST00000541494 223 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 AC006512.2-201ENST00000543250 486 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 MRPS36P5-201ENST00000551909 298 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
PHGDHO43175 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC015688.2-201ENST00000584523 262 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 AC061975.8-201ENST00000587058 721 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.59□□□□□ -1.51
PHGDHO43175 PCNAP1-202ENST00000595299 752 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 COX6CP7-201ENST00000597056 208 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 VN1R78P-201ENST00000597393 564 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.59□□□□□ -1.51
PHGDHO43175 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.59□□□□□ -1.51
PHGDHO43175 AC007349.4-201ENST00000608114 532 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 AC090607.5-201ENST00000615692 224 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 AC139769.3-201ENST00000618383 175 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 AC015726.3-201ENST00000624501 418 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 AL390318.1-201ENST00000624564 687 ntBASIC5.59□□□□□ -1.51
PHGDHO43175 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PHGDHO43175 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHGDHO43175 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.59□□□□□ -1.52
PHGDHO43175 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PHGDHO43175 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.59□□□□□ -1.52
PHGDHO43175 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC007842.1-201ENST00000597336 2039 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PHGDHO43175 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 GVINP1-202ENST00000531871 7271 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PHGDHO43175 RN7SKP187-201ENST00000365536 330 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PHGDHO43175 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 RNA5SP187-201ENST00000384400 119 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PHGDHO43175 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 MTND4P13-201ENST00000402078 1023 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 AL590290.1-201ENST00000405336 380 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 SNORA11C-201ENST00000408532 129 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 RPSAP35-201ENST00000413753 818 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.58□□□□□ -1.52
PHGDHO43175 OR5M12P-201ENST00000423388 929 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 HIGD1AP4-201ENST00000430194 280 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.58□□□□□ -1.52
PHGDHO43175 AL359265.1-201ENST00000440296 795 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 AC087672.1-201ENST00000479876 766 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms