Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.32□□□□□ -1.56
CLDN3O15551 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN3O15551 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN3O15551 FTH1P11-201ENST00000517577 551 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 RPL23AP53-201ENST00000521854 457 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN3O15551 EIF4A2P5-201ENST00000529914 499 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN3O15551 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN3O15551 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN3O15551 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CLDN3O15551 MTND2P13-201ENST00000577438 1039 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CLDN3O15551 BNIP3P32-201ENST00000600015 554 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 AC004948.1-201ENST00000609858 672 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 AC091953.3-201ENST00000623220 236 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN3O15551 SMG1P4-204ENST00000523028 4131 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN3O15551 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN3O15551 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN3O15551 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CLDN3O15551 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN3O15551 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN3O15551 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN3O15551 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN3O15551 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN3O15551 AC000374.1-201ENST00000434698 1745 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN3O15551 AL022393.1-201ENST00000625142 1677 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 MAPK10-263ENST00000641052 4307 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN3O15551 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN3O15551 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN3O15551 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN3O15551 AC114755.2-201ENST00000413520 361 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN3O15551 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN3O15551 GTF3AP5-201ENST00000442645 697 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN3O15551 OR1H1P-201ENST00000448731 937 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 AC105233.1-201ENST00000498840 781 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN3O15551 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN3O15551 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN3O15551 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN3O15551 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN3O15551 AL049839.1-201ENST00000556151 657 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN3O15551 SNORA74C-1-201ENST00000580726 201 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 MIR3667-201ENST00000581025 74 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 MIR4737-201ENST00000583979 81 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN3O15551 AC011453.2-201ENST00000603737 729 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 OR51C1P-201ENST00000608504 942 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.31□□□□□ -1.56
CLDN3O15551 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN3O15551 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN3O15551 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLDN3O15551 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN3O15551 AC073429.2-201ENST00000569694 1444 ntBASIC5.31□□□□□ -1.56
CLDN3O15551 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN3O15551 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN3O15551 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLDN3O15551 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN3O15551 AC107021.2-201ENST00000567714 2095 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN3O15551 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLDN3O15551 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLDN3O15551 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.3□□□□□ -1.56
CLDN3O15551 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN3O15551 MIR937-201ENST00000401271 86 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 RPL10P10-201ENST00000403509 664 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 RNA5SP113-201ENST00000410486 84 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN3O15551 ARAFP1-201ENST00000422172 605 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 RCC2P2-201ENST00000422174 918 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 AL360081.1-201ENST00000428299 555 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN3O15551 AL049745.1-201ENST00000433953 286 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN3O15551 AL356981.1-201ENST00000454879 684 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 SEPT7P6-201ENST00000469999 1143 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN3O15551 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN3O15551 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.3□□□□□ -1.56
CLDN3O15551 AC084033.1-201ENST00000550830 633 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN3O15551 AL121932.1-201ENST00000605542 214 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 AC100827.5-201ENST00000615883 426 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN3O15551 AL022401.1-201ENST00000619498 108 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 AC006840.1-201ENST00000623069 542 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 AL603750.1-201ENST00000624216 1717 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 AC027228.2-201ENST00000567141 2154 ntBASIC5.3□□□□□ -1.56
CLDN3O15551 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN3O15551 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN3O15551 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN3O15551 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLDN3O15551 SDAD1P1-202ENST00000524156 2051 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms