Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC098799.3-201ENST00000506095 438 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AP005119.1-201ENST00000580956 292 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 EIF1P5-201ENST00000585002 234 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AL671309.1-201ENST00000603750 544 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC244107.2-201ENST00000611773 76 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 CLUHP10-201ENST00000631979 980 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC022893.2-201ENST00000564832 3296 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 OR9G4-201ENST00000302957 984 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AL159987.1-201ENST00000347911 293 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 MIR708-201ENST00000390708 88 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AL096711.1-201ENST00000404780 554 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 MIR1271-201ENST00000408537 86 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 NUP35P2-201ENST00000416748 943 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AL121882.1-201ENST00000422893 417 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AL138479.1-201ENST00000426913 484 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 KCTD9P1-201ENST00000430462 1167 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC004865.1-201ENST00000442276 1003 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AL034369.1-201ENST00000453808 477 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 snoU13.7-201ENST00000459220 104 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC018635.1-201ENST00000468292 1030 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 RN7SL583P-201ENST00000475692 287 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC090638.1-201ENST00000498296 909 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC083829.1-201ENST00000503756 657 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC114324.2-202ENST00000503812 134 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 MTND2P26-201ENST00000528255 1029 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 HSPE1P2-201ENST00000554777 306 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC068768.2-201ENST00000602352 343 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 LLPHP1-201ENST00000603571 367 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC233280.2-201ENST00000603917 1070 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AL445493.3-201ENST00000619568 477 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 BX005214.3-202ENST00000619809 325 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AC008627.1-201ENST00000517511 1704 ntBASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGB1P1B2RPK0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 AP000542.2-201ENST00000623199 6179 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 RN7SKP44-201ENST00000363602 316 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 RNU4-27P-201ENST00000410889 139 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 AL732292.1-201ENST00000426692 226 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 ETF1P3-201ENST00000430422 1160 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 YWHAZP8-201ENST00000436935 731 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 HMGN1P32-201ENST00000441744 256 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 RPL31P11-202ENST00000454082 372 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 RANP1-206ENST00000455094 651 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 AP002453.1-201ENST00000492327 668 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 RN7SKP277-201ENST00000516895 283 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 AC021678.3-201ENST00000517893 476 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 AC022360.1-201ENST00000521058 340 ntBASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB1P1B2RPK0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms