Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AL590290.1-201ENST00000405336 380 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 VDAC1P10-201ENST00000416715 891 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC004690.1-201ENST00000418216 328 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC018804.1-201ENST00000430381 618 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 RPSAP62-201ENST00000432596 833 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 LDHAP2-201ENST00000437325 985 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 RPL7P11-201ENST00000437586 658 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 RPL7P14-201ENST00000449851 741 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 ST13P21-201ENST00000453250 1098 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AL133351.3-201ENST00000454998 193 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 RPL34P22-201ENST00000468193 318 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC079594.1-201ENST00000489757 331 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 RNF138P1-201ENST00000502765 546 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 KCTD9P5-201ENST00000504141 1170 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 OR5M14P-201ENST00000506803 618 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AK6P1-201ENST00000540219 478 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 HIGD1AP9-201ENST00000550710 279 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 OR4F28P-201ENST00000559128 938 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AL031846.1-201ENST00000560933 314 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC141257.3-201ENST00000572906 215 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 OR4F8P-201ENST00000589943 937 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AP001120.4-201ENST00000590231 108 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC007255.2-201ENST00000604053 631 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC007363.1-201ENST00000604736 620 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AL009028.1-201ENST00000604895 802 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 MLECP1-201ENST00000615893 709 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AL356274.1-201ENST00000617064 410 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 FARSBP1-201ENST00000435808 1778 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 CASC19-228ENST00000641414 1684 ntBASIC5.84□□□□□ -1.47
SHISA3A0PJX4 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SHISA3A0PJX4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.84□□□□□ -1.48
SHISA3A0PJX4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SHISA3A0PJX4 MTCO1P14-201ENST00000441695 1559 ntBASIC5.84□□□□□ -1.48
SHISA3A0PJX4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.84□□□□□ -1.48
SHISA3A0PJX4 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC5.84□□□□□ -1.48
SHISA3A0PJX4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.84□□□□□ -1.48
SHISA3A0PJX4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms