Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 DHX9P1-201ENST00000436565 3076 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL034370.1-201ENST00000397254 1590 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC132825.1-201ENST00000463573 2247 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 ATP5HP3-201ENST00000396994 486 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL136116.2-201ENST00000404020 785 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RPA2P2-201ENST00000419698 796 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 EIF4HP2-201ENST00000424380 563 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 BX323845.1-201ENST00000432417 179 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CEACAMP9-201ENST00000442990 513 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 OR1H1P-201ENST00000448731 937 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC006463.2-201ENST00000473326 348 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RPS26P24-201ENST00000497656 331 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SUMO2P4-201ENST00000504193 276 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 GOLGA5P1-201ENST00000507317 980 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 Y_RNA.719-201ENST00000517156 106 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 HIGD1AP5-201ENST00000529959 259 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 TVP23CP2-201ENST00000571473 623 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MIR3667-201ENST00000581025 74 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RNF138P2-201ENST00000603490 592 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC104687.2-201ENST00000604442 342 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC005377.1-201ENST00000605126 456 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC239803.2-201ENST00000610161 430 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL161616.1-201ENST00000611867 286 ntBASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC009643.2-201ENST00000603543 1448 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL513548.1-201ENST00000562904 1724 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RNU2-50P-201ENST00000410494 143 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC002524.1-201ENST00000411687 547 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SLC25A18P1-201ENST00000449385 454 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 GAPDHP56-201ENST00000506031 988 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL671862.1-201ENST00000515851 349 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MIR6798-201ENST00000612887 67 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL049794.2-201ENST00000616301 365 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC010435.1-201ENST00000623353 1177 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV4S1A1TA0A5B7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms