Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 AC117947.1-201ENST00000427448 529 ntBASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 AL138966.2-201ENST00000621997 464 ntBASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 RNF165-205ENST00000588679 2904 ntBASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.36■□□□□ 0.85
DNMT3BQ9UBC3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 CCR12P-201ENST00000446203 998 ntBASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3BQ9UBC3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 SLC25A1P2-201ENST00000430693 912 ntBASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 AC007663.1-201ENST00000438948 1240 ntBASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 AC063952.2-201ENST00000498792 1227 ntBASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 AC022616.7-201ENST00000525383 220 ntBASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 AL162377.1-201ENST00000618844 1793 ntBASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3BQ9UBC3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNMT3BQ9UBC3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DNMT3BQ9UBC3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNMT3BQ9UBC3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms