Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS16Q9H269 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS16Q9H269 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.41■■□□□ 1.02
VPS16Q9H269 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
VPS16Q9H269 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
VPS16Q9H269 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.41■■□□□ 1.02
VPS16Q9H269 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.41■■□□□ 1.02
VPS16Q9H269 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
VPS16Q9H269 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
VPS16Q9H269 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.41■■□□□ 1.02
VPS16Q9H269 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.41■■□□□ 1.02
VPS16Q9H269 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
VPS16Q9H269 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.41■■□□□ 1.02
VPS16Q9H269 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.41■■□□□ 1.02
VPS16Q9H269 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.41■■□□□ 1.02
VPS16Q9H269 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.41■■□□□ 1.02
VPS16Q9H269 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS16Q9H269 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VPS16Q9H269 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
VPS16Q9H269 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
VPS16Q9H269 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.4■■□□□ 1.02
VPS16Q9H269 TFP1-202ENST00000475455 1573 ntBASIC21.4■■□□□ 1.02
VPS16Q9H269 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
VPS16Q9H269 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS16Q9H269 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VPS16Q9H269 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS16Q9H269 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.4■■□□□ 1.02
VPS16Q9H269 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.4■■□□□ 1.02
VPS16Q9H269 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.4■■□□□ 1.02
VPS16Q9H269 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
VPS16Q9H269 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS16Q9H269 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.4■■□□□ 1.02
VPS16Q9H269 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.4■■□□□ 1.02
VPS16Q9H269 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VPS16Q9H269 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS16Q9H269 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
VPS16Q9H269 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS16Q9H269 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
VPS16Q9H269 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.39■■□□□ 1.02
VPS16Q9H269 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
VPS16Q9H269 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
VPS16Q9H269 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
VPS16Q9H269 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.39■■□□□ 1.02
VPS16Q9H269 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
VPS16Q9H269 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS16Q9H269 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.39■■□□□ 1.01
VPS16Q9H269 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.39■■□□□ 1.01
VPS16Q9H269 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.39■■□□□ 1.01
VPS16Q9H269 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
VPS16Q9H269 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
VPS16Q9H269 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS16Q9H269 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.39■■□□□ 1.01
VPS16Q9H269 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VPS16Q9H269 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.39■■□□□ 1.01
VPS16Q9H269 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
VPS16Q9H269 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS16Q9H269 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS16Q9H269 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS16Q9H269 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS16Q9H269 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS16Q9H269 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.38■■□□□ 1.01
VPS16Q9H269 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS16Q9H269 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.38■■□□□ 1.01
VPS16Q9H269 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
VPS16Q9H269 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS16Q9H269 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS16Q9H269 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VPS16Q9H269 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.38■■□□□ 1.01
VPS16Q9H269 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.38■■□□□ 1.01
VPS16Q9H269 MIR663A-201ENST00000385250 93 ntBASIC21.38■■□□□ 1.01
VPS16Q9H269 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VPS16Q9H269 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.38■■□□□ 1.01
VPS16Q9H269 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.38■■□□□ 1.01
VPS16Q9H269 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.38■■□□□ 1.01
VPS16Q9H269 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.38■■□□□ 1.01
VPS16Q9H269 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VPS16Q9H269 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS16Q9H269 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS16Q9H269 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VPS16Q9H269 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
VPS16Q9H269 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
VPS16Q9H269 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.37■■□□□ 1.01
VPS16Q9H269 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
VPS16Q9H269 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
VPS16Q9H269 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
VPS16Q9H269 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS16Q9H269 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.37■■□□□ 1.01
VPS16Q9H269 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.37■■□□□ 1.01
VPS16Q9H269 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms