Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC26.12■■□□□ 1.77
ABCA3Q99758 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC26.12■■□□□ 1.77
ABCA3Q99758 BX119927.1-201ENST00000636596 1552 ntBASIC26.12■■□□□ 1.77
ABCA3Q99758 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ABCA3Q99758 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ABCA3Q99758 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC26.12■■□□□ 1.77
ABCA3Q99758 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
ABCA3Q99758 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA3Q99758 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA3Q99758 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA3Q99758 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC26.11■■□□□ 1.77
ABCA3Q99758 PPIH-202ENST00000372549 327 ntTSL 3 BASIC26.11■■□□□ 1.77
ABCA3Q99758 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA3Q99758 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC26.11■■□□□ 1.77
ABCA3Q99758 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC26.11■■□□□ 1.77
ABCA3Q99758 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC26.11■■□□□ 1.77
ABCA3Q99758 MIR3652-201ENST00000579335 131 ntBASIC26.11■■□□□ 1.77
ABCA3Q99758 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA3Q99758 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.11■■□□□ 1.77
ABCA3Q99758 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.11■■□□□ 1.77
ABCA3Q99758 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA3Q99758 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA3Q99758 AC004870.1-201ENST00000315132 882 ntBASIC26.11■■□□□ 1.77
ABCA3Q99758 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
ABCA3Q99758 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC26.11■■□□□ 1.77
ABCA3Q99758 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA3Q99758 FGF14-AS2-201ENST00000606448 1074 ntBASIC26.11■■□□□ 1.77
ABCA3Q99758 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC26.11■■□□□ 1.77
ABCA3Q99758 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.1■■□□□ 1.77
ABCA3Q99758 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ABCA3Q99758 KRT8P11-201ENST00000409686 1436 ntBASIC26.1■■□□□ 1.77
ABCA3Q99758 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
ABCA3Q99758 FEM1AP4-201ENST00000443167 1987 ntBASIC26.1■■□□□ 1.77
ABCA3Q99758 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
ABCA3Q99758 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ABCA3Q99758 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ABCA3Q99758 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ABCA3Q99758 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC26.1■■□□□ 1.77
ABCA3Q99758 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ABCA3Q99758 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ABCA3Q99758 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA3Q99758 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC26.09■■□□□ 1.77
ABCA3Q99758 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA3Q99758 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA3Q99758 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
ABCA3Q99758 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.09■■□□□ 1.77
ABCA3Q99758 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA3Q99758 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA3Q99758 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA3Q99758 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA3Q99758 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA3Q99758 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA3Q99758 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC26.08■■□□□ 1.77
ABCA3Q99758 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC26.08■■□□□ 1.77
ABCA3Q99758 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC26.08■■□□□ 1.77
ABCA3Q99758 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC26.08■■□□□ 1.77
ABCA3Q99758 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA3Q99758 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC26.08■■□□□ 1.77
ABCA3Q99758 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
ABCA3Q99758 TBC1D3P2-202ENST00000577902 1649 ntBASIC26.08■■□□□ 1.77
ABCA3Q99758 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA3Q99758 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC26.08■■□□□ 1.77
ABCA3Q99758 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
ABCA3Q99758 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.76
ABCA3Q99758 AC079781.3-201ENST00000449110 356 ntBASIC26.08■■□□□ 1.76
ABCA3Q99758 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC26.08■■□□□ 1.76
ABCA3Q99758 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.08■■□□□ 1.76
ABCA3Q99758 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
ABCA3Q99758 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA3Q99758 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA3Q99758 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA3Q99758 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA3Q99758 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC26.07■■□□□ 1.76
ABCA3Q99758 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC26.07■■□□□ 1.76
ABCA3Q99758 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC26.07■■□□□ 1.76
ABCA3Q99758 TSPY12P-201ENST00000421279 868 ntBASIC26.07■■□□□ 1.76
ABCA3Q99758 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA3Q99758 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC26.07■■□□□ 1.76
ABCA3Q99758 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA3Q99758 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA3Q99758 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC26.07■■□□□ 1.76
ABCA3Q99758 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
ABCA3Q99758 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA3Q99758 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA3Q99758 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
ABCA3Q99758 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
ABCA3Q99758 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA3Q99758 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC26.06■■□□□ 1.76
ABCA3Q99758 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
ABCA3Q99758 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA3Q99758 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC26.06■■□□□ 1.76
ABCA3Q99758 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA3Q99758 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA3Q99758 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
ABCA3Q99758 AL671883.3-201ENST00000603274 991 ntBASIC26.06■■□□□ 1.76
ABCA3Q99758 AL732292.2-201ENST00000609649 430 ntBASIC26.06■■□□□ 1.76
ABCA3Q99758 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC26.06■■□□□ 1.76
ABCA3Q99758 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA3Q99758 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA3Q99758 AP001271.2-201ENST00000624018 1556 ntBASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms