Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATL1Q8WXF7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATL1Q8WXF7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATL1Q8WXF7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
ATL1Q8WXF7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ATL1Q8WXF7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 AL020996.1-203ENST00000536896 2307 ntBASIC19.03■□□□□ 0.64
ATL1Q8WXF7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.03■□□□□ 0.64
ATL1Q8WXF7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.03■□□□□ 0.64
ATL1Q8WXF7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATL1Q8WXF7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 AC008403.3-201ENST00000598924 454 ntBASIC19.02■□□□□ 0.64
ATL1Q8WXF7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATL1Q8WXF7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATL1Q8WXF7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.02■□□□□ 0.63
ATL1Q8WXF7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATL1Q8WXF7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.02■□□□□ 0.63
ATL1Q8WXF7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ATL1Q8WXF7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATL1Q8WXF7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
ATL1Q8WXF7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19■□□□□ 0.63
ATL1Q8WXF7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19■□□□□ 0.63
ATL1Q8WXF7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19■□□□□ 0.63
ATL1Q8WXF7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 NME1-207ENST00000480143 964 ntTSL 2 BASIC19■□□□□ 0.63
ATL1Q8WXF7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19■□□□□ 0.63
ATL1Q8WXF7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
ATL1Q8WXF7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19■□□□□ 0.63
ATL1Q8WXF7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19■□□□□ 0.63
ATL1Q8WXF7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19■□□□□ 0.63
ATL1Q8WXF7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms