Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM3Q8TF72 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 TUBB8P6-201ENST00000436895 1288 ntBASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 PRKY-204ENST00000533551 1019 ntBASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM3Q8TF72 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
SHROOM3Q8TF72 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.89■□□□□ 0.78
SHROOM3Q8TF72 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SHROOM3Q8TF72 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.89■□□□□ 0.78
SHROOM3Q8TF72 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 MIR718-201ENST00000390190 70 ntBASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 KRT16P5-201ENST00000455284 522 ntBASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.89■□□□□ 0.77
SHROOM3Q8TF72 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 RPPH1-201ENST00000516869 333 ntBASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 AL445228.2-201ENST00000605589 952 ntBASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 AL353708.3-201ENST00000610272 989 ntBASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM3Q8TF72 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms