Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 TUBB8P6-201ENST00000436895 1288 ntBASIC20.54■□□□□ 0.88
MMP8P22894 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP8P22894 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP8P22894 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MMP8P22894 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.54■□□□□ 0.88
MMP8P22894 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP8P22894 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.54■□□□□ 0.88
MMP8P22894 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP8P22894 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MMP8P22894 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP8P22894 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MMP8P22894 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP8P22894 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MMP8P22894 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP8P22894 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP8P22894 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MMP8P22894 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP8P22894 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.53■□□□□ 0.88
MMP8P22894 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.53■□□□□ 0.88
MMP8P22894 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.53■□□□□ 0.88
MMP8P22894 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.53■□□□□ 0.88
MMP8P22894 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP8P22894 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MMP8P22894 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP8P22894 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP8P22894 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MMP8P22894 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.53■□□□□ 0.88
MMP8P22894 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MMP8P22894 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.52■□□□□ 0.88
MMP8P22894 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP8P22894 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP8P22894 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
MMP8P22894 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MMP8P22894 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
MMP8P22894 NBPF21P-201ENST00000425093 1451 ntBASIC20.52■□□□□ 0.88
MMP8P22894 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP8P22894 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP8P22894 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
MMP8P22894 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.52■□□□□ 0.88
MMP8P22894 CD99P1-205ENST00000527459 561 ntBASIC20.52■□□□□ 0.88
MMP8P22894 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.52■□□□□ 0.88
MMP8P22894 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.52■□□□□ 0.88
MMP8P22894 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.52■□□□□ 0.88
MMP8P22894 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MMP8P22894 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.52■□□□□ 0.88
MMP8P22894 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP8P22894 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP8P22894 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP8P22894 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MMP8P22894 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.52■□□□□ 0.87
MMP8P22894 AC104417.2-201ENST00000562989 1793 ntBASIC20.51■□□□□ 0.87
MMP8P22894 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MMP8P22894 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP8P22894 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP8P22894 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MMP8P22894 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
MMP8P22894 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP8P22894 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MMP8P22894 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP8P22894 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MMP8P22894 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP8P22894 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP8P22894 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP8P22894 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
MMP8P22894 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MMP8P22894 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP8P22894 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP8P22894 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP8P22894 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP8P22894 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP8P22894 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.5■□□□□ 0.87
MMP8P22894 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.5■□□□□ 0.87
MMP8P22894 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
MMP8P22894 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.5■□□□□ 0.87
MMP8P22894 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.5■□□□□ 0.87
MMP8P22894 MIR4651-201ENST00000582622 73 ntBASIC20.5■□□□□ 0.87
MMP8P22894 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MMP8P22894 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.5■□□□□ 0.87
MMP8P22894 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.5■□□□□ 0.87
MMP8P22894 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP8P22894 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms