Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.53■□□□□ 0.88
BEST1O76090 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.53■□□□□ 0.88
BEST1O76090 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.53■□□□□ 0.88
BEST1O76090 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
BEST1O76090 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BEST1O76090 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
BEST1O76090 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
BEST1O76090 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.52■□□□□ 0.88
BEST1O76090 TREX1-205ENST00000625293 1783 ntBASIC20.52■□□□□ 0.88
BEST1O76090 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.52■□□□□ 0.88
BEST1O76090 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BEST1O76090 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.52■□□□□ 0.88
BEST1O76090 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
BEST1O76090 AC004980.1-204ENST00000429707 299 ntBASIC20.52■□□□□ 0.88
BEST1O76090 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.52■□□□□ 0.88
BEST1O76090 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
BEST1O76090 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BEST1O76090 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.52■□□□□ 0.88
BEST1O76090 AL355075.4-201ENST00000554988 638 ntBASIC20.52■□□□□ 0.88
BEST1O76090 AP003071.4-201ENST00000562276 1284 ntBASIC20.52■□□□□ 0.88
BEST1O76090 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BEST1O76090 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.52■□□□□ 0.88
BEST1O76090 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
BEST1O76090 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
BEST1O76090 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BEST1O76090 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.52■□□□□ 0.87
BEST1O76090 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.87
BEST1O76090 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST1O76090 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST1O76090 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
BEST1O76090 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.51■□□□□ 0.87
BEST1O76090 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST1O76090 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.51■□□□□ 0.87
BEST1O76090 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
BEST1O76090 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST1O76090 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.51■□□□□ 0.87
BEST1O76090 NUDT16P1-203ENST00000513809 620 ntBASIC20.51■□□□□ 0.87
BEST1O76090 MIR4785-201ENST00000585005 73 ntBASIC20.51■□□□□ 0.87
BEST1O76090 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.51■□□□□ 0.87
BEST1O76090 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.51■□□□□ 0.87
BEST1O76090 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST1O76090 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST1O76090 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
BEST1O76090 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST1O76090 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST1O76090 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BEST1O76090 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST1O76090 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.5■□□□□ 0.87
BEST1O76090 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST1O76090 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST1O76090 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
BEST1O76090 AL158211.5-201ENST00000623583 2518 ntBASIC20.5■□□□□ 0.87
BEST1O76090 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST1O76090 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST1O76090 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
BEST1O76090 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.5■□□□□ 0.87
BEST1O76090 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST1O76090 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST1O76090 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.5■□□□□ 0.87
BEST1O76090 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.5■□□□□ 0.87
BEST1O76090 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST1O76090 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BEST1O76090 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BEST1O76090 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST1O76090 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.5■□□□□ 0.87
BEST1O76090 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.49■□□□□ 0.87
BEST1O76090 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
BEST1O76090 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.49■□□□□ 0.87
BEST1O76090 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.49■□□□□ 0.87
BEST1O76090 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BEST1O76090 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST1O76090 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.49■□□□□ 0.87
BEST1O76090 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST1O76090 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST1O76090 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BEST1O76090 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
BEST1O76090 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.49■□□□□ 0.87
BEST1O76090 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BEST1O76090 AL355355.2-201ENST00000442321 338 ntBASIC20.49■□□□□ 0.87
BEST1O76090 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.49■□□□□ 0.87
BEST1O76090 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
BEST1O76090 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BEST1O76090 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.49■□□□□ 0.87
BEST1O76090 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST1O76090 REXO1L10P-201ENST00000615707 1290 ntBASIC20.49■□□□□ 0.87
BEST1O76090 REXO1L12P-201ENST00000622156 912 ntBASIC20.49■□□□□ 0.87
BEST1O76090 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
BEST1O76090 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.49■□□□□ 0.87
BEST1O76090 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.49■□□□□ 0.87
BEST1O76090 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST1O76090 KRT17P2-201ENST00000300992 1314 ntBASIC20.49■□□□□ 0.87
BEST1O76090 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BEST1O76090 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms