Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 AC098590.1-201ENST00000468126 897 ntBASIC18.7■□□□□ 0.58
NDUFS4O43181 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NDUFS4O43181 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NDUFS4O43181 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.7■□□□□ 0.58
NDUFS4O43181 AC004264.1-201ENST00000608354 794 ntBASIC18.7■□□□□ 0.58
NDUFS4O43181 TMEM191A-211ENST00000637163 1067 ntBASIC18.7■□□□□ 0.58
NDUFS4O43181 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
NDUFS4O43181 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.7■□□□□ 0.58
NDUFS4O43181 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
NDUFS4O43181 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.69■□□□□ 0.58
NDUFS4O43181 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDUFS4O43181 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDUFS4O43181 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDUFS4O43181 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDUFS4O43181 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NDUFS4O43181 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.69■□□□□ 0.58
NDUFS4O43181 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.69■□□□□ 0.58
NDUFS4O43181 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.69■□□□□ 0.58
NDUFS4O43181 AC133681.1-201ENST00000465482 601 ntBASIC18.69■□□□□ 0.58
NDUFS4O43181 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.69■□□□□ 0.58
NDUFS4O43181 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.69■□□□□ 0.58
NDUFS4O43181 AL359736.2-201ENST00000621992 437 ntBASIC18.69■□□□□ 0.58
NDUFS4O43181 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NDUFS4O43181 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDUFS4O43181 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.69■□□□□ 0.58
NDUFS4O43181 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDUFS4O43181 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.69■□□□□ 0.58
NDUFS4O43181 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.69■□□□□ 0.58
NDUFS4O43181 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.68■□□□□ 0.58
NDUFS4O43181 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.68■□□□□ 0.58
NDUFS4O43181 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NDUFS4O43181 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
NDUFS4O43181 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 AL158047.1-201ENST00000445918 881 ntBASIC18.68■□□□□ 0.58
NDUFS4O43181 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.68■□□□□ 0.58
NDUFS4O43181 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NDUFS4O43181 AC142381.4-202ENST00000563973 229 ntBASIC18.68■□□□□ 0.58
NDUFS4O43181 AC110285.5-201ENST00000611501 352 ntBASIC18.68■□□□□ 0.58
NDUFS4O43181 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.68■□□□□ 0.58
NDUFS4O43181 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NDUFS4O43181 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NDUFS4O43181 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NDUFS4O43181 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NDUFS4O43181 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS4O43181 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NDUFS4O43181 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.67■□□□□ 0.58
NDUFS4O43181 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.67■□□□□ 0.58
NDUFS4O43181 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NDUFS4O43181 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.67■□□□□ 0.58
NDUFS4O43181 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.67■□□□□ 0.58
NDUFS4O43181 TUBB8P6-201ENST00000436895 1288 ntBASIC18.67■□□□□ 0.58
NDUFS4O43181 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 KRT18P16-201ENST00000510337 1294 ntBASIC18.67■□□□□ 0.58
NDUFS4O43181 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.67■□□□□ 0.58
NDUFS4O43181 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NDUFS4O43181 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NDUFS4O43181 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS4O43181 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.67■□□□□ 0.58
NDUFS4O43181 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS4O43181 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NDUFS4O43181 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS4O43181 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NDUFS4O43181 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS4O43181 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.66■□□□□ 0.58
NDUFS4O43181 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS4O43181 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NDUFS4O43181 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.66■□□□□ 0.58
NDUFS4O43181 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS4O43181 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS4O43181 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS4O43181 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS4O43181 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms