Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
ATP2A1O14983 AP005212.1-201ENST00000581547 1997 ntBASIC22.36■■□□□ 1.17
ATP2A1O14983 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.36■■□□□ 1.17
ATP2A1O14983 AL162377.1-201ENST00000618844 1793 ntBASIC22.36■■□□□ 1.17
ATP2A1O14983 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.36■■□□□ 1.17
ATP2A1O14983 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.36■■□□□ 1.17
ATP2A1O14983 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.36■■□□□ 1.17
ATP2A1O14983 ECEL1P2-202ENST00000465689 757 ntBASIC22.36■■□□□ 1.17
ATP2A1O14983 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.36■■□□□ 1.17
ATP2A1O14983 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.36■■□□□ 1.17
ATP2A1O14983 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
ATP2A1O14983 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
ATP2A1O14983 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.36■■□□□ 1.17
ATP2A1O14983 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.36■■□□□ 1.17
ATP2A1O14983 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.36■■□□□ 1.17
ATP2A1O14983 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP2A1O14983 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP2A1O14983 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
ATP2A1O14983 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
ATP2A1O14983 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP2A1O14983 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
ATP2A1O14983 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP2A1O14983 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.35■■□□□ 1.17
ATP2A1O14983 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP2A1O14983 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP2A1O14983 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP2A1O14983 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ATP2A1O14983 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.35■■□□□ 1.17
ATP2A1O14983 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP2A1O14983 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP2A1O14983 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.35■■□□□ 1.17
ATP2A1O14983 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP2A1O14983 MFAP1P1-201ENST00000442257 1255 ntBASIC22.35■■□□□ 1.17
ATP2A1O14983 AC104076.2-201ENST00000448912 469 ntBASIC22.35■■□□□ 1.17
ATP2A1O14983 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP2A1O14983 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.35■■□□□ 1.17
ATP2A1O14983 AL160286.2-201ENST00000567150 934 ntBASIC22.35■■□□□ 1.17
ATP2A1O14983 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP2A1O14983 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ATP2A1O14983 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP2A1O14983 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ATP2A1O14983 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.34■■□□□ 1.17
ATP2A1O14983 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP2A1O14983 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ATP2A1O14983 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.34■■□□□ 1.17
ATP2A1O14983 AC009237.14-201ENST00000609975 1594 ntBASIC22.34■■□□□ 1.17
ATP2A1O14983 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.34■■□□□ 1.17
ATP2A1O14983 INGX-201ENST00000359239 846 ntBASIC22.34■■□□□ 1.17
ATP2A1O14983 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP2A1O14983 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP2A1O14983 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.34■■□□□ 1.17
ATP2A1O14983 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ATP2A1O14983 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
ATP2A1O14983 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP2A1O14983 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
ATP2A1O14983 AL137060.1-201ENST00000618151 2648 ntBASIC22.34■■□□□ 1.17
ATP2A1O14983 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP2A1O14983 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP2A1O14983 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP2A1O14983 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.33■■□□□ 1.17
ATP2A1O14983 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
ATP2A1O14983 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATP2A1O14983 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.33■■□□□ 1.17
ATP2A1O14983 SLC25A1P2-201ENST00000430693 912 ntBASIC22.33■■□□□ 1.17
ATP2A1O14983 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.33■■□□□ 1.17
ATP2A1O14983 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ATP2A1O14983 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.33■■□□□ 1.17
ATP2A1O14983 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.33■■□□□ 1.17
ATP2A1O14983 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.33■■□□□ 1.17
ATP2A1O14983 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.33■■□□□ 1.17
ATP2A1O14983 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.33■■□□□ 1.17
ATP2A1O14983 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATP2A1O14983 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ATP2A1O14983 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.33■■□□□ 1.16
ATP2A1O14983 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.33■■□□□ 1.16
ATP2A1O14983 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ATP2A1O14983 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.32■■□□□ 1.16
ATP2A1O14983 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
ATP2A1O14983 AL512408.1-201ENST00000569378 2000 ntBASIC22.32■■□□□ 1.16
ATP2A1O14983 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
ATP2A1O14983 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP2A1O14983 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP2A1O14983 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP2A1O14983 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.32■■□□□ 1.16
ATP2A1O14983 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP2A1O14983 DUX4L26-201ENST00000489078 1255 ntBASIC22.32■■□□□ 1.16
ATP2A1O14983 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
ATP2A1O14983 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP2A1O14983 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
ATP2A1O14983 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms