Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC27.29■■□□□ 1.96
CHD2O14647 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CHD2O14647 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CHD2O14647 FP700111.2-201ENST00000619190 1892 ntBASIC27.29■■□□□ 1.96
CHD2O14647 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD2O14647 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC27.28■■□□□ 1.96
CHD2O14647 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC27.28■■□□□ 1.96
CHD2O14647 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC27.28■■□□□ 1.96
CHD2O14647 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CHD2O14647 AC092119.3-201ENST00000612618 583 ntBASIC27.28■■□□□ 1.96
CHD2O14647 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC27.28■■□□□ 1.96
CHD2O14647 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
CHD2O14647 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
CHD2O14647 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHD2O14647 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CHD2O14647 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHD2O14647 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CHD2O14647 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD2O14647 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD2O14647 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
CHD2O14647 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC27.27■■□□□ 1.96
CHD2O14647 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD2O14647 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD2O14647 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD2O14647 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD2O14647 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
CHD2O14647 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD2O14647 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD2O14647 NME1-207ENST00000480143 964 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD2O14647 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD2O14647 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CHD2O14647 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CHD2O14647 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC27.27■■□□□ 1.96
CHD2O14647 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
CHD2O14647 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD2O14647 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC27.26■■□□□ 1.95
CHD2O14647 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
CHD2O14647 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC27.26■■□□□ 1.95
CHD2O14647 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
CHD2O14647 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
CHD2O14647 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD2O14647 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD2O14647 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC27.26■■□□□ 1.95
CHD2O14647 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC27.26■■□□□ 1.95
CHD2O14647 LINC01465-201ENST00000408887 1940 ntBASIC27.25■■□□□ 1.95
CHD2O14647 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CHD2O14647 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD2O14647 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CHD2O14647 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD2O14647 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
CHD2O14647 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CHD2O14647 UNC93B7-201ENST00000509439 705 ntBASIC27.25■■□□□ 1.95
CHD2O14647 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC27.25■■□□□ 1.95
CHD2O14647 FGF14-AS2-201ENST00000606448 1074 ntBASIC27.25■■□□□ 1.95
CHD2O14647 WDR6-223ENST00000627177 207 ntTSL 2 BASIC27.25■■□□□ 1.95
CHD2O14647 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD2O14647 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
CHD2O14647 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC27.25■■□□□ 1.95
CHD2O14647 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CHD2O14647 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC27.25■■□□□ 1.95
CHD2O14647 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD2O14647 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD2O14647 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CHD2O14647 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC27.25■■□□□ 1.95
CHD2O14647 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC27.25■■□□□ 1.95
CHD2O14647 AL031008.1-201ENST00000619963 541 ntBASIC27.25■■□□□ 1.95
CHD2O14647 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHD2O14647 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHD2O14647 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHD2O14647 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC27.24■■□□□ 1.95
CHD2O14647 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC27.24■■□□□ 1.95
CHD2O14647 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC27.24■■□□□ 1.95
CHD2O14647 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD2O14647 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC27.24■■□□□ 1.95
CHD2O14647 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHD2O14647 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC27.23■■□□□ 1.95
CHD2O14647 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHD2O14647 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
CHD2O14647 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
CHD2O14647 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC27.23■■□□□ 1.95
CHD2O14647 PPIH-202ENST00000372549 327 ntTSL 3 BASIC27.23■■□□□ 1.95
CHD2O14647 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CHD2O14647 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHD2O14647 FEM1AP4-201ENST00000443167 1987 ntBASIC27.23■■□□□ 1.95
CHD2O14647 KRT8P11-201ENST00000409686 1436 ntBASIC27.23■■□□□ 1.95
CHD2O14647 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC27.23■■□□□ 1.95
CHD2O14647 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHD2O14647 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.23■■□□□ 1.95
CHD2O14647 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHD2O14647 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHD2O14647 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC27.23■■□□□ 1.95
CHD2O14647 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHD2O14647 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CHD2O14647 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CHD2O14647 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CHD2O14647 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC27.22■■□□□ 1.95
CHD2O14647 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CHD2O14647 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC27.22■■□□□ 1.95
CHD2O14647 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
CHD2O14647 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms