Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL21O00585 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCL21O00585 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.22■□□□□ 0.35
CCL21O00585 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
CCL21O00585 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL21O00585 TPM4P1-201ENST00000436100 807 ntBASIC17.22■□□□□ 0.35
CCL21O00585 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CCL21O00585 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.22■□□□□ 0.35
CCL21O00585 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL21O00585 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.22■□□□□ 0.35
CCL21O00585 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.22■□□□□ 0.35
CCL21O00585 AL023973.1-201ENST00000624619 620 ntBASIC17.22■□□□□ 0.35
CCL21O00585 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCL21O00585 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCL21O00585 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 SMG8-203ENST00000578922 2178 ntBASIC17.22■□□□□ 0.35
CCL21O00585 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL21O00585 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL21O00585 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCL21O00585 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CCL21O00585 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCL21O00585 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCL21O00585 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL21O00585 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL21O00585 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL21O00585 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL21O00585 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL21O00585 CA15P1-201ENST00000481698 905 ntBASIC17.21■□□□□ 0.35
CCL21O00585 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CCL21O00585 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL21O00585 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCL21O00585 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.21■□□□□ 0.34
CCL21O00585 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.21■□□□□ 0.34
CCL21O00585 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.2■□□□□ 0.34
CCL21O00585 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.2■□□□□ 0.34
CCL21O00585 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.2■□□□□ 0.34
CCL21O00585 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.2■□□□□ 0.34
CCL21O00585 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL21O00585 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CCL21O00585 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL21O00585 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL21O00585 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL21O00585 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL21O00585 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.19■□□□□ 0.34
CCL21O00585 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.19■□□□□ 0.34
CCL21O00585 AL441883.1-201ENST00000566170 1045 ntBASIC17.19■□□□□ 0.34
CCL21O00585 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.19■□□□□ 0.34
CCL21O00585 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.19■□□□□ 0.34
CCL21O00585 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
CCL21O00585 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCL21O00585 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL21O00585 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL21O00585 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL21O00585 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL21O00585 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.19■□□□□ 0.34
CCL21O00585 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.19■□□□□ 0.34
CCL21O00585 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCL21O00585 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL21O00585 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.19■□□□□ 0.34
CCL21O00585 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL21O00585 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL21O00585 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL21O00585 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CCL21O00585 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL21O00585 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL21O00585 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL21O00585 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL21O00585 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL21O00585 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL21O00585 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.18■□□□□ 0.34
CCL21O00585 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.18■□□□□ 0.34
CCL21O00585 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL21O00585 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL21O00585 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.18■□□□□ 0.34
CCL21O00585 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.18■□□□□ 0.34
CCL21O00585 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.18■□□□□ 0.34
CCL21O00585 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCL21O00585 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms